PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

/

Imported from atlas release summary for Alnus rubra.

1961
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
Reset
Gene Pathway Family Confidence Status Best Target
alnus_rubra_ALNRU00125261-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00125277-RA Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00127145-RA Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
alnus_rubra_ALNRU00127174-RA Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
alnus_rubra_ALNRU00128354-RA Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
alnus_rubra_ALNRU00128741-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
alnus_rubra_ALNRU00128747-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
alnus_rubra_ALNRU00131031-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
alnus_rubra_ALNRU00132175-RA Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00132181-RA Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00132188-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00132779-RA Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
alnus_rubra_ALNRU00132796-RA Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
alnus_rubra_ALNRU00134681-RA Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
alnus_rubra_ALNRU00135805-RA Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00135812-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
alnus_rubra_ALNRU00135816-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00136612-RA Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
alnus_rubra_ALNRU00136620-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
alnus_rubra_ALNRU00136845-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00136847-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00137157-RA Terpenoid CYP76 low borderline CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
alnus_rubra_ALNRU00137293-RA Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
alnus_rubra_ALNRU00138160-RA Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00138161-RA Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00138548-RA Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
alnus_rubra_ALNRU00138549-RA Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
alnus_rubra_ALNRU00140193-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00140976-RA Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
alnus_rubra_ALNRU00141243-RA Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI