PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

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Imported from atlas release summary for Alnus rubra.

1961
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status Best Target
alnus_rubra_ALNRU00119520-RA Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
alnus_rubra_ALNRU00119839-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
alnus_rubra_ALNRU00120167-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
alnus_rubra_ALNRU00123440-RA Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
alnus_rubra_ALNRU00123554-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
alnus_rubra_ALNRU00125400-RA Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
alnus_rubra_ALNRU00125617-RA Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
alnus_rubra_ALNRU00127792-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
alnus_rubra_ALNRU00127797-RA Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
alnus_rubra_ALNRU00129470-RA Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
alnus_rubra_ALNRU00129765-RA Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
alnus_rubra_ALNRU00129770-RA Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
alnus_rubra_ALNRU00129830-RA Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
alnus_rubra_ALNRU00130394-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
alnus_rubra_ALNRU00130400-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
alnus_rubra_ALNRU00131441-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
alnus_rubra_ALNRU00131511-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
alnus_rubra_ALNRU00131517-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
alnus_rubra_ALNRU00131769-RA Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
alnus_rubra_ALNRU00131774-RA Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
alnus_rubra_ALNRU00131779-RA Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
alnus_rubra_ALNRU00132855-RA Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
alnus_rubra_ALNRU00133937-RA Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
alnus_rubra_ALNRU00134757-RA Phenylpropanoid POD medium pass POD__00016__sp_Q6QPJ6_PRXQ_POPJC
alnus_rubra_ALNRU00136833-RA Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
alnus_rubra_ALNRU00136836-RA Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
alnus_rubra_ALNRU00136838-RA Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
alnus_rubra_ALNRU00136894-RA Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
alnus_rubra_ALNRU00138861-RA Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
alnus_rubra_ALNRU00138867-RA Phenylpropanoid POD low borderline POD__00013__sp_Q4W1I8_PER1_ZINEL