PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

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Imported from atlas release summary for Alnus rubra.

1961
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
alnus_rubra_ALNRU00000554-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00001307-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00002203-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00007007-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00011055-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00012708-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00016802-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00019938-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00019942-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00021556-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00027680-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00032567-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00035416-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00035423-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00035639-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00035644-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00038062-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00038833-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00045876-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00045967-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00052249-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00054207-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00055740-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00060273-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00061908-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00063923-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00076010-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00076011-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00080598-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00081345-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00083415-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00087439-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00090869-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00095706-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00109878-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00113194-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00113987-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00115576-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00115581-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00115806-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00130727-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00131147-RA Rosmarinic Acid 4CL low borderline
alnus_rubra_ALNRU00138326-RA Rosmarinic Acid 4CL medium pass
alnus_rubra_ALNRU00000859-RA Rosmarinic Acid C4H low borderline
alnus_rubra_ALNRU00001369-RA Rosmarinic Acid C4H low borderline
alnus_rubra_ALNRU00002259-RA Rosmarinic Acid C4H medium pass
alnus_rubra_ALNRU00002452-RA Rosmarinic Acid C4H medium pass
alnus_rubra_ALNRU00002532-RA Rosmarinic Acid C4H low borderline
alnus_rubra_ALNRU00002545-RA Rosmarinic Acid C4H low borderline
alnus_rubra_ALNRU00003270-RA Rosmarinic Acid C4H medium pass