PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

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Imported from atlas release summary for Alnus rubra.

1961
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
alnus_rubra_ALNRU00096053-RA Steroid CAS medium pass
alnus_rubra_ALNRU00096054-RA Steroid CAS medium pass
alnus_rubra_ALNRU00096065-RA Steroid CAS medium pass
alnus_rubra_ALNRU00096067-RA Steroid CAS medium pass
alnus_rubra_ALNRU00096069-RA Steroid CAS medium pass
alnus_rubra_ALNRU00096094-RA Steroid CAS medium pass
alnus_rubra_ALNRU00096095-RA Steroid CAS medium pass
alnus_rubra_ALNRU00100228-RA Steroid CAS medium pass
alnus_rubra_ALNRU00100241-RA Steroid CAS medium pass
alnus_rubra_ALNRU00100250-RA Steroid CAS low borderline
alnus_rubra_ALNRU00101568-RA Steroid CAS medium pass
alnus_rubra_ALNRU00101581-RA Steroid CAS medium pass
alnus_rubra_ALNRU00104413-RA Steroid CAS medium pass
alnus_rubra_ALNRU00104424-RA Steroid CAS medium pass
alnus_rubra_ALNRU00104425-RA Steroid CAS medium pass
alnus_rubra_ALNRU00105799-RA Steroid CAS medium pass
alnus_rubra_ALNRU00105808-RA Steroid CAS medium pass
alnus_rubra_ALNRU00105812-RA Steroid CAS medium pass
alnus_rubra_ALNRU00111970-RA Steroid CAS medium pass
alnus_rubra_ALNRU00112017-RA Steroid CAS medium pass
alnus_rubra_ALNRU00112026-RA Steroid CAS medium pass
alnus_rubra_ALNRU00112034-RA Steroid CAS medium pass
alnus_rubra_ALNRU00112060-RA Steroid CAS medium pass
alnus_rubra_ALNRU00115729-RA Steroid CAS medium pass
alnus_rubra_ALNRU00124466-RA Steroid CAS medium pass
alnus_rubra_ALNRU00124473-RA Steroid CAS medium pass
alnus_rubra_ALNRU00124479-RA Steroid CAS medium pass
alnus_rubra_ALNRU00124480-RA Steroid CAS medium pass
alnus_rubra_ALNRU00124484-RA Steroid CAS medium pass
alnus_rubra_ALNRU00125563-RA Steroid CAS medium pass
alnus_rubra_ALNRU00125577-RA Steroid CAS medium pass
alnus_rubra_ALNRU00125801-RA Steroid CAS medium pass
alnus_rubra_ALNRU00126624-RA Steroid CAS low borderline
alnus_rubra_ALNRU00127552-RA Steroid CAS medium pass
alnus_rubra_ALNRU00130069-RA Steroid CAS medium pass
alnus_rubra_ALNRU00131807-RA Steroid CAS medium pass
alnus_rubra_ALNRU00134064-RA Steroid CAS medium pass
alnus_rubra_ALNRU00138061-RA Steroid CAS medium pass
alnus_rubra_ALNRU00139679-RA Steroid CAS medium pass
alnus_rubra_ALNRU00140457-RA Steroid CAS medium pass
alnus_rubra_ALNRU00141030-RA Steroid CAS medium pass
alnus_rubra_ALNRU00003456-RA Steroid CPD/CYP90A1 low borderline
alnus_rubra_ALNRU00003533-RA Steroid CPD/CYP90A1 medium borderline
alnus_rubra_ALNRU00009485-RA Steroid CPD/CYP90A1 low borderline
alnus_rubra_ALNRU00013215-RA Steroid CPD/CYP90A1 low borderline
alnus_rubra_ALNRU00019879-RA Steroid CPD/CYP90A1 low borderline
alnus_rubra_ALNRU00033706-RA Steroid CPD/CYP90A1 medium borderline
alnus_rubra_ALNRU00064682-RA Steroid CPD/CYP90A1 low borderline
alnus_rubra_ALNRU00066169-RA Steroid CPD/CYP90A1 low borderline
alnus_rubra_ALNRU00073305-RA Steroid CPD/CYP90A1 low borderline