PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

/

Imported from atlas release summary for Alnus rubra.

2075
Candidate Protein Records
1961
Pathway-Level Records
4369
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
alnus_rubra_ALNRU00114860-RA Alkaloid CNMT low borderline
alnus_rubra_ALNRU00117349-RA Alkaloid CNMT medium borderline
alnus_rubra_ALNRU00000949-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00006709-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00013023-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00017798-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00022738-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00025381-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00029548-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00029549-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00029564-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00029579-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00032122-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00033578-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00036637-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00036642-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00036646-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00037406-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00043158-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00043874-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00043879-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00050902-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00051321-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00051674-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00058226-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00059608-RA Alkaloid CODM/T6ODM low borderline
alnus_rubra_ALNRU00060812-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00064419-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00064422-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00070142-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00073783-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00073789-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00074302-RA Alkaloid CODM/T6ODM low borderline
alnus_rubra_ALNRU00074337-RA Alkaloid CODM/T6ODM low borderline
alnus_rubra_ALNRU00076204-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00077490-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00077495-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00077502-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00077505-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00077516-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00077522-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00077534-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00081696-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00084083-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00086140-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00086293-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00087224-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00091278-RA Alkaloid CODM/T6ODM medium borderline
alnus_rubra_ALNRU00091472-RA Alkaloid CODM/T6ODM low borderline
alnus_rubra_ALNRU00094138-RA Alkaloid CODM/T6ODM medium borderline