PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

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Imported from atlas release summary for Alnus rubra.

2075
Candidate Protein Records
1961
Pathway-Level Records
4369
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
alnus_rubra_ALNRU00085651-RA Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
alnus_rubra_ALNRU00085652-RA Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
alnus_rubra_ALNRU00085653-RA Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
alnus_rubra_ALNRU00085657-RA Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
alnus_rubra_ALNRU00086532-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00093415-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00093417-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00093419-RA Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00093424-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00093435-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00093447-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00093451-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00096932-RA Phenylpropanoid CAD medium pass CAD__00004__sp_B5LAT8_CAD1_CAPAN
alnus_rubra_ALNRU00096934-RA Phenylpropanoid CAD medium pass CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
alnus_rubra_ALNRU00097037-RA Phenylpropanoid CAD low borderline CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
alnus_rubra_ALNRU00099520-RA Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
alnus_rubra_ALNRU00104413-RA Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00104424-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00104425-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00111970-RA Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00112017-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00112026-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00112034-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00112060-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00112394-RA Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
alnus_rubra_ALNRU00113877-RA Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
alnus_rubra_ALNRU00115729-RA Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00118518-RA Phenylpropanoid CAD low borderline CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
alnus_rubra_ALNRU00122793-RA Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
alnus_rubra_ALNRU00124301-RA Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
alnus_rubra_ALNRU00125563-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00125577-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00125801-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00131807-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00134064-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00138061-RA Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00139679-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00140457-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00141030-RA Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
alnus_rubra_ALNRU00000329-RA Phenylpropanoid CCR medium pass CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
alnus_rubra_ALNRU00021881-RA Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
alnus_rubra_ALNRU00034548-RA Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
alnus_rubra_ALNRU00035551-RA Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
alnus_rubra_ALNRU00069900-RA Phenylpropanoid CCR medium borderline CCR__00008__sp_Q9S9N9_CCR1_ARATH
alnus_rubra_ALNRU00070321-RA Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
alnus_rubra_ALNRU00088711-RA Phenylpropanoid CCR low borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
alnus_rubra_ALNRU00089346-RA Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
alnus_rubra_ALNRU00099517-RA Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
alnus_rubra_ALNRU00118051-RA Phenylpropanoid CCR medium borderline CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
alnus_rubra_ALNRU00119707-RA Phenylpropanoid CCR medium borderline CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ