PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

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Imported from atlas release summary for Alnus rubra.

2075
Candidate Protein Records
1961
Pathway-Level Records
4369
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
alnus_rubra_ALNRU00030270-RA Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00030475-RA Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00030508-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00030525-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00043013-RA Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00045919-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00045925-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00045926-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00045929-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00045943-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00045947-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00045948-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00045953-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00077041-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00080321-RA Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00111241-RA Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
alnus_rubra_ALNRU00111256-RA Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
alnus_rubra_ALNRU00111265-RA Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
alnus_rubra_ALNRU00115709-RA Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
alnus_rubra_ALNRU00115720-RA Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
alnus_rubra_ALNRU00132361-RA Rosmarinic Acid TAT medium pass TAT__00002__sp_Q9C969_ISS1_ARATH
alnus_rubra_ALNRU00132564-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00132565-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00132572-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00132576-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00132580-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00137760-RA Rosmarinic Acid TAT medium pass TAT__00003__sp_Q9LVY1_TAT_ARATH
alnus_rubra_ALNRU00138698-RA Rosmarinic Acid TAT medium pass TAT__00001__sp_A0A2K8FQU5_TAT_CATRO
alnus_rubra_ALNRU00139250-RA Rosmarinic Acid TAT low borderline TAT__00001__sp_A0A2K8FQU5_TAT_CATRO