PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Aaltescaffold_60413380 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_60413480 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_60421190 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_60422680 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_60425610 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_60427060 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_60436910 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_60437100 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_70445600 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_80482410 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_80500950 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_80501090 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_90506870 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_90508030 Steroid BR6OX2/CYP85A2 medium borderline
Aaltescaffold_90522250 Steroid BR6OX2/CYP85A2 low borderline
Aaltescaffold_100082150 Steroid CAS medium pass
Aaltescaffold_100094490 Steroid CAS medium pass
Aaltescaffold_100094560 Steroid CAS medium pass
Aaltescaffold_10072380 Steroid CAS medium pass
Aaltescaffold_10072390 Steroid CAS medium pass
Aaltescaffold_20196860 Steroid CAS medium pass
Aaltescaffold_20220050 Steroid CAS medium pass
Aaltescaffold_30249620 Steroid CAS medium pass
Aaltescaffold_30289910 Steroid CAS medium pass
Aaltescaffold_30290010 Steroid CAS medium pass
Aaltescaffold_50358880 Steroid CAS medium pass
Aaltescaffold_50359580 Steroid CAS medium pass
Aaltescaffold_50362130 Steroid CAS medium pass
Aaltescaffold_50362200 Steroid CAS medium pass
Aaltescaffold_50362760 Steroid CAS medium pass
Aaltescaffold_50372310 Steroid CAS low borderline
Aaltescaffold_50372400 Steroid CAS low borderline
Aaltescaffold_50383370 Steroid CAS low borderline
Aaltescaffold_60417650 Steroid CAS low borderline
Aaltescaffold_60433280 Steroid CAS medium pass
Aaltescaffold_70451600 Steroid CAS medium pass
Aaltescaffold_70465090 Steroid CAS medium pass
Aaltescaffold_80481650 Steroid CAS medium pass
Aaltescaffold_80489660 Steroid CAS medium pass
Aaltescaffold_20211390 Steroid CPD/CYP90A1 medium borderline
Aaltescaffold_20217460 Steroid CPD/CYP90A1 medium borderline
Aaltescaffold_20217480 Steroid CPD/CYP90A1 medium borderline
Aaltescaffold_30307250 Steroid CPD/CYP90A1 medium borderline
Aaltescaffold_40334010 Steroid CPD/CYP90A1 medium borderline
Aaltescaffold_60437060 Steroid CPD/CYP90A1 medium borderline
Aaltescaffold_70455030 Steroid CPD/CYP90A1 medium borderline
Aaltescaffold_80476140 Steroid CPD/CYP90A1 low borderline
Aaltescaffold_60418580 Steroid CPI1 high pass
Aaltescaffold_90510170 Steroid CPI1 high pass
Aaltescaffold_30276440 Steroid CYP51G1 medium borderline