PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Aaltescaffold_50370440 Steroid CYP51G1 medium borderline
Aaltescaffold_50376940 Steroid CYP51G1 medium borderline
Aaltescaffold_60425650 Steroid CYP51G1 medium borderline
Aaltescaffold_60437080 Steroid CYP51G1 medium borderline
Aaltescaffold_90522360 Steroid CYP51G1 medium borderline
Aaltescaffold_30266760 Steroid CYP90D1 low borderline
Aaltescaffold_30308470 Steroid CYP90D1 low borderline
Aaltescaffold_50368770 Steroid CYP90D1 low borderline
Aaltescaffold_60422690 Steroid CYP90D1 low borderline
Aaltescaffold_60427510 Steroid CYP90D1 low borderline
Aaltescaffold_70443100 Steroid CYP90D1 low borderline
Aaltescaffold_90506930 Steroid CYP90D1 low borderline
Aaltescaffold_90506970 Steroid CYP90D1 low borderline
Aaltescaffold_100092010 Steroid DET2 low borderline
Aaltescaffold_20225940 Steroid DET2 low borderline
Aaltescaffold_60414570 Steroid DET2 low borderline
Aaltescaffold_80467840 Steroid DET2 medium pass
Aaltescaffold_80477320 Steroid DET2 low borderline
Aaltescaffold_30301020 Steroid DWF1 medium pass
Aaltescaffold_10007690 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_100084940 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_100100240 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_100107480 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_100115180 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_100120280 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_20183690 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_20185470 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_20193230 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_20210690 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_20214030 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_20214050 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_20221720 Steroid DWF4/CYP90B1 medium borderline
Aaltescaffold_30266160 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_30277650 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_30301030 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_30310050 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_40324910 Steroid DWF4/CYP90B1 medium borderline
Aaltescaffold_40332600 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_40334630 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_40335230 Steroid DWF4/CYP90B1 medium borderline
Aaltescaffold_40342460 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_40344940 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_40351840 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_50362140 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_50362340 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_50362370 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_50362670 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_50407580 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_60418330 Steroid DWF4/CYP90B1 low borderline
Aaltescaffold_60422670 Steroid DWF4/CYP90B1 low borderline