PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Aaltescaffold_90530700 Terpenoid BAHD low borderline
Aaltescaffold_90532440 Terpenoid BAHD low borderline
Aaltescaffold_90532580 Terpenoid BAHD medium pass
Aaltescaffold_90533710 Terpenoid BAHD medium pass
Aaltescaffold_90533700 Terpenoid CMK/IspE high pass
Aaltescaffold_100091090 Terpenoid CYP71 low borderline
Aaltescaffold_10031380 Terpenoid CYP71 low borderline
Aaltescaffold_10032260 Terpenoid CYP71 medium pass
Aaltescaffold_10068290 Terpenoid CYP71 low borderline
Aaltescaffold_20203100 Terpenoid CYP71 low borderline
Aaltescaffold_20203150 Terpenoid CYP71 low borderline
Aaltescaffold_20209750 Terpenoid CYP71 low borderline
Aaltescaffold_20213910 Terpenoid CYP71 medium pass
Aaltescaffold_20231030 Terpenoid CYP71 medium pass
Aaltescaffold_30276570 Terpenoid CYP71 medium pass
Aaltescaffold_30284880 Terpenoid CYP71 medium pass
Aaltescaffold_30300140 Terpenoid CYP71 low borderline
Aaltescaffold_30307410 Terpenoid CYP71 medium pass
Aaltescaffold_40328950 Terpenoid CYP71 medium pass
Aaltescaffold_40337420 Terpenoid CYP71 medium pass
Aaltescaffold_40337430 Terpenoid CYP71 medium pass
Aaltescaffold_50365190 Terpenoid CYP71 low borderline
Aaltescaffold_50386530 Terpenoid CYP71 medium pass
Aaltescaffold_60428980 Terpenoid CYP71 medium pass
Aaltescaffold_60437100 Terpenoid CYP71 medium borderline
Aaltescaffold_70449280 Terpenoid CYP71 medium pass
Aaltescaffold_70466130 Terpenoid CYP71 low borderline
Aaltescaffold_80477990 Terpenoid CYP71 low borderline
Aaltescaffold_90533880 Terpenoid CYP71 medium pass
Aaltescaffold_100084370 Terpenoid CYP76 medium pass
Aaltescaffold_100084610 Terpenoid CYP76 medium pass
Aaltescaffold_100085420 Terpenoid CYP76 low borderline
Aaltescaffold_100086470 Terpenoid CYP76 medium borderline
Aaltescaffold_100086480 Terpenoid CYP76 medium borderline
Aaltescaffold_100086490 Terpenoid CYP76 medium borderline
Aaltescaffold_100086500 Terpenoid CYP76 medium borderline
Aaltescaffold_100095640 Terpenoid CYP76 medium borderline
Aaltescaffold_100100240 Terpenoid CYP76 medium borderline
Aaltescaffold_100106570 Terpenoid CYP76 medium borderline
Aaltescaffold_100107480 Terpenoid CYP76 medium borderline
Aaltescaffold_100115180 Terpenoid CYP76 medium borderline
Aaltescaffold_100120280 Terpenoid CYP76 medium borderline
Aaltescaffold_10033710 Terpenoid CYP76 medium pass
Aaltescaffold_10042180 Terpenoid CYP76 medium pass
Aaltescaffold_10042190 Terpenoid CYP76 medium pass
Aaltescaffold_10053730 Terpenoid CYP76 medium pass
Aaltescaffold_20185470 Terpenoid CYP76 medium pass
Aaltescaffold_20185650 Terpenoid CYP76 medium borderline
Aaltescaffold_20186850 Terpenoid CYP76 medium pass
Aaltescaffold_20191620 Terpenoid CYP76 medium pass