PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Aaltescaffold_20191630 Terpenoid CYP76 medium pass
Aaltescaffold_20192640 Terpenoid CYP76 low borderline
Aaltescaffold_20193230 Terpenoid CYP76 medium pass
Aaltescaffold_20194750 Terpenoid CYP76 medium pass
Aaltescaffold_20207910 Terpenoid CYP76 medium pass
Aaltescaffold_20210690 Terpenoid CYP76 medium borderline
Aaltescaffold_20211390 Terpenoid CYP76 low borderline
Aaltescaffold_20211460 Terpenoid CYP76 medium borderline
Aaltescaffold_20211870 Terpenoid CYP76 medium pass
Aaltescaffold_20214900 Terpenoid CYP76 low borderline
Aaltescaffold_20217460 Terpenoid CYP76 medium borderline
Aaltescaffold_20217480 Terpenoid CYP76 medium borderline
Aaltescaffold_20221690 Terpenoid CYP76 low borderline
Aaltescaffold_20221720 Terpenoid CYP76 medium borderline
Aaltescaffold_20223480 Terpenoid CYP76 low borderline
Aaltescaffold_20235750 Terpenoid CYP76 medium borderline
Aaltescaffold_30266160 Terpenoid CYP76 medium borderline
Aaltescaffold_30276440 Terpenoid CYP76 low borderline
Aaltescaffold_30277650 Terpenoid CYP76 medium pass
Aaltescaffold_30286470 Terpenoid CYP76 low borderline
Aaltescaffold_30286480 Terpenoid CYP76 medium pass
Aaltescaffold_30301030 Terpenoid CYP76 medium pass
Aaltescaffold_30301040 Terpenoid CYP76 medium pass
Aaltescaffold_30308470 Terpenoid CYP76 medium pass
Aaltescaffold_30310040 Terpenoid CYP76 low borderline
Aaltescaffold_30310050 Terpenoid CYP76 medium borderline
Aaltescaffold_40324820 Terpenoid CYP76 medium borderline
Aaltescaffold_40327910 Terpenoid CYP76 low borderline
Aaltescaffold_40332600 Terpenoid CYP76 low borderline
Aaltescaffold_40334630 Terpenoid CYP76 medium borderline
Aaltescaffold_40336670 Terpenoid CYP76 medium pass
Aaltescaffold_40342460 Terpenoid CYP76 medium borderline
Aaltescaffold_40344940 Terpenoid CYP76 medium pass
Aaltescaffold_40345010 Terpenoid CYP76 low borderline
Aaltescaffold_40347110 Terpenoid CYP76 medium pass
Aaltescaffold_40351840 Terpenoid CYP76 medium pass
Aaltescaffold_40352460 Terpenoid CYP76 medium pass
Aaltescaffold_40352470 Terpenoid CYP76 medium borderline
Aaltescaffold_40352660 Terpenoid CYP76 medium pass
Aaltescaffold_40353420 Terpenoid CYP76 medium pass
Aaltescaffold_50362140 Terpenoid CYP76 medium pass
Aaltescaffold_50362340 Terpenoid CYP76 low borderline
Aaltescaffold_50362370 Terpenoid CYP76 low borderline
Aaltescaffold_50362670 Terpenoid CYP76 medium pass
Aaltescaffold_50368770 Terpenoid CYP76 medium borderline
Aaltescaffold_50369900 Terpenoid CYP76 medium pass
Aaltescaffold_50370440 Terpenoid CYP76 medium pass
Aaltescaffold_50370530 Terpenoid CYP76 medium borderline
Aaltescaffold_50370770 Terpenoid CYP76 medium pass
Aaltescaffold_50376140 Terpenoid CYP76 medium borderline