PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
Aaltescaffold_50376940 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
Aaltescaffold_50380150 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Aaltescaffold_50380450 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Aaltescaffold_50380460 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Aaltescaffold_50381130 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Aaltescaffold_50407580 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Aaltescaffold_50407790 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Aaltescaffold_50407890 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Aaltescaffold_50407910 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Aaltescaffold_60413380 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Aaltescaffold_60413480 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Aaltescaffold_60418330 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Aaltescaffold_60421190 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Aaltescaffold_60422670 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Aaltescaffold_60422680 Terpenoid CYP76 medium pass CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
Aaltescaffold_60422690 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Aaltescaffold_60422700 Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Aaltescaffold_60423440 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
Aaltescaffold_60423630 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Aaltescaffold_60423680 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Aaltescaffold_60425610 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Aaltescaffold_60425650 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Aaltescaffold_60434230 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Aaltescaffold_60436910 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Aaltescaffold_60437060 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Aaltescaffold_60437080 Terpenoid CYP76 medium borderline CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM
Aaltescaffold_60437110 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Aaltescaffold_60437560 Terpenoid CYP76 low borderline CYP76__00015__sp_P0DKI2_C76AN_BETVU
Aaltescaffold_60439540 Terpenoid CYP76 low borderline CYP76__00024__sp_W0FKI0_DOX1_PERHD
Aaltescaffold_70442990 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Aaltescaffold_70443100 Terpenoid CYP76 low borderline CYP76__00007__sp_A0A1D8QMD2_C76K7_ROSOF
Aaltescaffold_70445600 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Aaltescaffold_70449840 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Aaltescaffold_70455030 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Aaltescaffold_70461770 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Aaltescaffold_80476010 Terpenoid CYP76 medium pass CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
Aaltescaffold_80476910 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Aaltescaffold_80479680 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Aaltescaffold_80479990 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Aaltescaffold_80482410 Terpenoid CYP76 medium borderline CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ
Aaltescaffold_80500950 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Aaltescaffold_90506340 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Aaltescaffold_90508030 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Aaltescaffold_90513580 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Aaltescaffold_90516700 Terpenoid CYP76 low borderline CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
Aaltescaffold_90517780 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Aaltescaffold_90522250 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Aaltescaffold_90522360 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Aaltescaffold_90528650 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
Aaltescaffold_50390940 Terpenoid DXR high pass DXR__00001__sp_Q9XFS9_DXR_ARATH