PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

891
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Aaltescaffold_30249620 Alkaloid GES low borderline
Aaltescaffold_30289910 Alkaloid GES medium pass
Aaltescaffold_30290010 Alkaloid GES low borderline
Aaltescaffold_50358880 Alkaloid GES low borderline
Aaltescaffold_50359580 Alkaloid GES low borderline
Aaltescaffold_50362130 Alkaloid GES low borderline
Aaltescaffold_50362200 Alkaloid GES low borderline
Aaltescaffold_80489660 Alkaloid GES low borderline
Aaltescaffold_90509180 Alkaloid GES medium pass
Aaltescaffold_100079720 Alkaloid GS low borderline
Aaltescaffold_100081220 Alkaloid GS low borderline
Aaltescaffold_100081360 Alkaloid GS low borderline
Aaltescaffold_100094790 Alkaloid GS medium pass
Aaltescaffold_100094830 Alkaloid GS medium pass
Aaltescaffold_100095320 Alkaloid GS low borderline
Aaltescaffold_100110320 Alkaloid GS low borderline
Aaltescaffold_10011090 Alkaloid GS low borderline
Aaltescaffold_100112750 Alkaloid GS low borderline
Aaltescaffold_10011300 Alkaloid GS low borderline
Aaltescaffold_10067840 Alkaloid GS low borderline
Aaltescaffold_20202690 Alkaloid GS low borderline
Aaltescaffold_20212290 Alkaloid GS low borderline
Aaltescaffold_20220040 Alkaloid GS low borderline
Aaltescaffold_20225280 Alkaloid GS high pass
Aaltescaffold_20225910 Alkaloid GS medium pass
Aaltescaffold_20231960 Alkaloid GS high pass
Aaltescaffold_30264360 Alkaloid GS low borderline
Aaltescaffold_30279240 Alkaloid GS medium pass
Aaltescaffold_40335500 Alkaloid GS medium pass
Aaltescaffold_40341430 Alkaloid GS high pass
Aaltescaffold_40341760 Alkaloid GS high pass
Aaltescaffold_50407740 Alkaloid GS low borderline
Aaltescaffold_50408810 Alkaloid GS low borderline
Aaltescaffold_60435170 Alkaloid GS low borderline
Aaltescaffold_70445950 Alkaloid GS low borderline
Aaltescaffold_80479810 Alkaloid GS low borderline
Aaltescaffold_80483000 Alkaloid GS low borderline
Aaltescaffold_80496000 Alkaloid GS low borderline
Aaltescaffold_90523980 Alkaloid GS medium pass
Aaltescaffold_90524010 Alkaloid GS medium pass
Aaltescaffold_90532530 Alkaloid GS low borderline
Aaltescaffold_100084920 Alkaloid H6H medium borderline
Aaltescaffold_100105040 Alkaloid H6H medium borderline
Aaltescaffold_100124830 Alkaloid H6H medium borderline
Aaltescaffold_10021030 Alkaloid H6H medium borderline
Aaltescaffold_10021810 Alkaloid H6H high pass
Aaltescaffold_10036740 Alkaloid H6H high pass
Aaltescaffold_20220350 Alkaloid H6H low borderline
Aaltescaffold_20231060 Alkaloid H6H low borderline
Aaltescaffold_30310550 Alkaloid H6H medium borderline