PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_40339140 Alkaloid H6H medium borderline
Aaltescaffold_470354570 Alkaloid H6H medium borderline
Aaltescaffold_50368100 Alkaloid H6H medium borderline
Aaltescaffold_50409020 Alkaloid H6H medium borderline
Aaltescaffold_60416090 Alkaloid H6H medium borderline
Aaltescaffold_70453050 Alkaloid H6H medium borderline
Aaltescaffold_80481000 Alkaloid H6H medium borderline
Aaltescaffold_80489900 Alkaloid H6H medium borderline
Aaltescaffold_10007690 Alkaloid IO low borderline
Aaltescaffold_100086470 Alkaloid IO medium borderline
Aaltescaffold_100086490 Alkaloid IO medium borderline
Aaltescaffold_100086500 Alkaloid IO medium borderline
Aaltescaffold_100107480 Alkaloid IO medium borderline
Aaltescaffold_10011210 Alkaloid IO low borderline
Aaltescaffold_10042180 Alkaloid IO low borderline
Aaltescaffold_20185470 Alkaloid IO medium borderline
Aaltescaffold_20185650 Alkaloid IO medium borderline
Aaltescaffold_20186700 Alkaloid IO low borderline
Aaltescaffold_20191620 Alkaloid IO medium borderline
Aaltescaffold_20193230 Alkaloid IO medium borderline
Aaltescaffold_20207910 Alkaloid IO medium borderline
Aaltescaffold_20211460 Alkaloid IO medium borderline
Aaltescaffold_20211870 Alkaloid IO medium borderline
Aaltescaffold_20214900 Alkaloid IO medium borderline
Aaltescaffold_20217460 Alkaloid IO medium borderline
Aaltescaffold_20217480 Alkaloid IO medium borderline
Aaltescaffold_30266160 Alkaloid IO medium borderline
Aaltescaffold_30280800 Alkaloid IO low borderline
Aaltescaffold_30286480 Alkaloid IO medium borderline
Aaltescaffold_30290890 Alkaloid IO low borderline
Aaltescaffold_30301030 Alkaloid IO medium borderline
Aaltescaffold_30310050 Alkaloid IO medium borderline
Aaltescaffold_40321360 Alkaloid IO low borderline
Aaltescaffold_40324820 Alkaloid IO medium borderline
Aaltescaffold_40334630 Alkaloid IO medium borderline
Aaltescaffold_50362370 Alkaloid IO medium borderline
Aaltescaffold_50369900 Alkaloid IO medium borderline
Aaltescaffold_50370530 Alkaloid IO medium borderline
Aaltescaffold_50372510 Alkaloid IO low borderline
Aaltescaffold_50380460 Alkaloid IO medium borderline
Aaltescaffold_60422690 Alkaloid IO medium borderline
Aaltescaffold_60425610 Alkaloid IO medium borderline
Aaltescaffold_60427510 Alkaloid IO low borderline
Aaltescaffold_60436910 Alkaloid IO medium borderline
Aaltescaffold_60437080 Alkaloid IO medium borderline
Aaltescaffold_70448340 Alkaloid IO low borderline
Aaltescaffold_70448360 Alkaloid IO low borderline
Aaltescaffold_80479680 Alkaloid IO medium borderline
Aaltescaffold_80479990 Alkaloid IO medium borderline
Aaltescaffold_90506340 Alkaloid IO medium borderline