PlantSME Plant secondary metabolism enzyme database

Archidium alternifolium (archidium_alternifolium)

Imported from atlas release summary for Archidium alternifolium.

1162
Candidate Protein Records
891
Pathway-Level Records
2303
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 259 11 POD (97) View species results
Terpenoid pathway 190 20 BAHD (58) View species results
Alkaloid pathway 161 19 PYKS (29) View species results
Flavonoid pathway 135 10 PAL (38) View species results
Rosmarinic acid pathway 95 7 PAL (38) View species results
Steroid pathway 51 12 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 897 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 126 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Aaltescaffold_90512070 Alkaloid IO low borderline
Aaltescaffold_90513580 Alkaloid IO medium borderline
Aaltescaffold_90516700 Alkaloid IO medium pass
Aaltescaffold_90517780 Alkaloid IO medium borderline
Aaltescaffold_90522250 Alkaloid IO medium borderline
Aaltescaffold_90528650 Alkaloid IO medium borderline
Aaltescaffold_110147410 Alkaloid ISY medium pass
Aaltescaffold_80478590 Alkaloid ISY medium pass
Aaltescaffold_90521150 Alkaloid ISY medium pass
Aaltescaffold_90521170 Alkaloid ISY medium pass
Aaltescaffold_100116830 Alkaloid LAMT medium pass
Aaltescaffold_10067940 Alkaloid LAMT low borderline
Aaltescaffold_20198850 Alkaloid LAMT low borderline
Aaltescaffold_60412950 Alkaloid LAMT medium borderline
Aaltescaffold_60413980 Alkaloid LAMT medium borderline
Aaltescaffold_70454250 Alkaloid LAMT low borderline
Aaltescaffold_80473620 Alkaloid LAMT medium pass
Aaltescaffold_10019330 Alkaloid MPO low borderline
Aaltescaffold_20188620 Alkaloid MPO high pass
Aaltescaffold_30304670 Alkaloid MPO high pass
Aaltescaffold_50364940 Alkaloid MPO medium pass
Aaltescaffold_50364950 Alkaloid MPO medium pass
Aaltescaffold_50388410 Alkaloid MPO high pass
Aaltescaffold_70443010 Alkaloid NCS medium borderline
Aaltescaffold_10002100 Alkaloid NMT medium pass
Aaltescaffold_100083680 Alkaloid NMT medium pass
Aaltescaffold_100084530 Alkaloid NMT medium pass
Aaltescaffold_100091120 Alkaloid NMT medium borderline
Aaltescaffold_100099600 Alkaloid NMT medium pass
Aaltescaffold_100099770 Alkaloid NMT medium pass
Aaltescaffold_100102150 Alkaloid NMT low borderline
Aaltescaffold_100117460 Alkaloid NMT low borderline
Aaltescaffold_100122790 Alkaloid NMT medium borderline
Aaltescaffold_10017840 Alkaloid NMT medium borderline
Aaltescaffold_10019010 Alkaloid NMT low borderline
Aaltescaffold_10020260 Alkaloid NMT low borderline
Aaltescaffold_10026610 Alkaloid NMT low borderline
Aaltescaffold_10026890 Alkaloid NMT low borderline
Aaltescaffold_10071680 Alkaloid NMT low borderline
Aaltescaffold_10075150 Alkaloid NMT low borderline
Aaltescaffold_110131400 Alkaloid NMT low borderline
Aaltescaffold_110135150 Alkaloid NMT medium pass
Aaltescaffold_110139120 Alkaloid NMT medium pass
Aaltescaffold_110140580 Alkaloid NMT low borderline
Aaltescaffold_110150680 Alkaloid NMT low borderline
Aaltescaffold_110162290 Alkaloid NMT medium pass
Aaltescaffold_110170530 Alkaloid NMT low borderline
Aaltescaffold_180183080 Alkaloid NMT medium pass
Aaltescaffold_20192940 Alkaloid NMT medium pass
Aaltescaffold_20194620 Alkaloid NMT low borderline