PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS10413860.1 Alkaloid T3O medium pass
BhybBhS10413860.2 Alkaloid T3O medium pass
BhybBhS10414650.1 Alkaloid T3O medium pass
BhybBhS20445530.1 Alkaloid T3O medium borderline
BhybBhS20447960.1 Alkaloid T3O medium pass
BhybBhS20447970.1 Alkaloid T3O low borderline
BhybBhS20447990.1 Alkaloid T3O low borderline
BhybBhS20449360.1 Alkaloid T3O medium borderline
BhybBhS20450110.1 Alkaloid T3O low borderline
BhybBhS20461920.1 Alkaloid T3O medium pass
BhybBhS20468420.1 Alkaloid T3O medium pass
BhybBhS20473160.1 Alkaloid T3O medium borderline
BhybBhS20474270.1 Alkaloid T3O medium borderline
BhybBhS20475540.1 Alkaloid T3O medium pass
BhybBhS20476560.1 Alkaloid T3O medium borderline
BhybBhS20476570.1 Alkaloid T3O medium borderline
BhybBhS20479440.1 Alkaloid T3O medium borderline
BhybBhS30487150.1 Alkaloid T3O medium borderline
BhybBhS30487160.1 Alkaloid T3O low borderline
BhybBhS30487170.1 Alkaloid T3O low borderline
BhybBhS30487190.1 Alkaloid T3O low borderline
BhybBhS30494280.1 Alkaloid T3O low borderline
BhybBhS30494290.1 Alkaloid T3O low borderline
BhybBhS30494320.1 Alkaloid T3O low borderline
BhybBhS30498240.1 Alkaloid T3O medium borderline
BhybBhS30501870.1 Alkaloid T3O medium borderline
BhybBhS30504140.1 Alkaloid T3O low borderline
BhybBhS30505690.1 Alkaloid T3O medium borderline
BhybBhS30506630.1 Alkaloid T3O medium pass
BhybBhS30510650.1 Alkaloid T3O medium borderline
BhybBhS30511760.1 Alkaloid T3O medium pass
BhybBhS30519370.1 Alkaloid T3O medium borderline
BhybBhS30519380.1 Alkaloid T3O medium borderline
BhybBhS40523120.1 Alkaloid T3O medium borderline
BhybBhS40527070.1 Alkaloid T3O medium pass
BhybBhS40530520.1 Alkaloid T3O medium pass
BhybBhS40532050.1 Alkaloid T3O low borderline
BhybBhS40532290.1 Alkaloid T3O low borderline
BhybBhS40536760.1 Alkaloid T3O medium pass
BhybBhS40542060.1 Alkaloid T3O medium borderline
BhybBhS40542060.2 Alkaloid T3O medium borderline
BhybBhS40547910.1 Alkaloid T3O low borderline
BhybBhS40550280.1 Alkaloid T3O medium borderline
BhybBhS40550300.1 Alkaloid T3O medium borderline
BhybBhS40550330.1 Alkaloid T3O medium borderline
BhybBhS40550420.1 Alkaloid T3O medium borderline
BhybBhS40552290.1 Alkaloid T3O medium borderline
BhybBhS40553410.1 Alkaloid T3O medium borderline
BhybBhS50558030.1 Alkaloid T3O medium pass
BhybBhS50562540.2 Alkaloid T3O medium pass