PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS50582920.1 Rosmarinic Acid C4H medium pass
BhybBhS50583560.1 Rosmarinic Acid C4H low borderline
BhybBhS50583570.1 Rosmarinic Acid C4H low borderline
BhybBhS50583580.1 Rosmarinic Acid C4H low borderline
BhybBhS50585960.1 Rosmarinic Acid C4H low borderline
BhybBhS50585990.1 Rosmarinic Acid C4H low borderline
BhybBhS50588240.1 Rosmarinic Acid C4H low borderline
BhybBhS50589430.1 Rosmarinic Acid C4H low borderline
BhybBhS50589430.2 Rosmarinic Acid C4H low borderline
BhybBhS50589440.1 Rosmarinic Acid C4H low borderline
BhybBhS60591390.1 Rosmarinic Acid C4H medium pass
BhybBhS60591830.1 Rosmarinic Acid C4H low borderline
BhybBhS60594030.1 Rosmarinic Acid C4H low borderline
BhybBhS60594160.1 Rosmarinic Acid C4H low borderline
BhybBhS60594920.1 Rosmarinic Acid C4H low borderline
BhybBhS60597420.1 Rosmarinic Acid C4H medium pass
BhybBhS60599990.1 Rosmarinic Acid C4H low borderline
BhybBhS60600570.1 Rosmarinic Acid C4H low borderline
BhybBhS60606350.1 Rosmarinic Acid C4H low borderline
BhybBhS60611810.1 Rosmarinic Acid C4H low borderline
BhybBhS60612710.1 Rosmarinic Acid C4H low borderline
BhybBhS70618560.1 Rosmarinic Acid C4H low borderline
BhybBhS70620750.1 Rosmarinic Acid C4H low borderline
BhybBhS70620790.1 Rosmarinic Acid C4H low borderline
BhybBhS70620800.1 Rosmarinic Acid C4H low borderline
BhybBhS70634160.1 Rosmarinic Acid C4H low borderline
BhybBhS70634470.1 Rosmarinic Acid C4H low borderline
BhybBhS70634490.1 Rosmarinic Acid C4H low borderline
BhybBhS70634510.1 Rosmarinic Acid C4H low borderline
BhybBhS70635150.1 Rosmarinic Acid C4H low borderline
BhybBhS70635600.1 Rosmarinic Acid C4H low borderline
BhybBhS70635620.1 Rosmarinic Acid C4H medium pass
BhybBhS70636590.1 Rosmarinic Acid C4H medium pass
BhybBhS70640670.1 Rosmarinic Acid C4H low borderline
BhybBhS70643550.1 Rosmarinic Acid C4H medium pass
BhybBhS80651450.1 Rosmarinic Acid C4H medium pass
BhybBhS80653060.1 Rosmarinic Acid C4H medium pass
BhybBhS80653530.1 Rosmarinic Acid C4H low borderline
BhybBhS80653530.2 Rosmarinic Acid C4H low borderline
BhybBhS80653690.1 Rosmarinic Acid C4H low borderline
BhybBhS80658130.1 Rosmarinic Acid C4H low borderline
BhybBhS80658140.1 Rosmarinic Acid C4H low borderline
BhybBhS80659020.1 Rosmarinic Acid C4H medium pass
BhybBhS80659060.1 Rosmarinic Acid C4H low borderline
BhybBhS80660640.1 Rosmarinic Acid C4H medium pass
BhybBhS80662940.1 Rosmarinic Acid C4H medium pass
BhybBhS80664150.1 Rosmarinic Acid C4H low borderline
BhybBhS80664930.1 Rosmarinic Acid C4H low borderline
BhybBhS90672430.1 Rosmarinic Acid C4H low borderline
BhybBhS90672950.1 Rosmarinic Acid C4H low borderline