PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS30506630.1 Rosmarinic Acid C4H low borderline
BhybBhS30510650.1 Rosmarinic Acid C4H low borderline
BhybBhS30510660.1 Rosmarinic Acid C4H low borderline
BhybBhS30512280.1 Rosmarinic Acid C4H medium pass
BhybBhS30512290.1 Rosmarinic Acid C4H low borderline
BhybBhS30512300.1 Rosmarinic Acid C4H medium pass
BhybBhS30512320.1 Rosmarinic Acid C4H low borderline
BhybBhS30512410.1 Rosmarinic Acid C4H low borderline
BhybBhS30512410.2 Rosmarinic Acid C4H low borderline
BhybBhS30512760.1 Rosmarinic Acid C4H low borderline
BhybBhS30514470.1 Rosmarinic Acid C4H low borderline
BhybBhS30518360.1 Rosmarinic Acid C4H low borderline
BhybBhS30519310.1 Rosmarinic Acid C4H low borderline
BhybBhS30519310.2 Rosmarinic Acid C4H low borderline
BhybBhS30519370.1 Rosmarinic Acid C4H medium pass
BhybBhS30519380.1 Rosmarinic Acid C4H medium pass
BhybBhS40523120.1 Rosmarinic Acid C4H medium pass
BhybBhS40523130.1 Rosmarinic Acid C4H medium pass
BhybBhS40530520.1 Rosmarinic Acid C4H low borderline
BhybBhS40532870.1 Rosmarinic Acid C4H medium pass
BhybBhS40536760.1 Rosmarinic Acid C4H low borderline
BhybBhS40542060.1 Rosmarinic Acid C4H medium pass
BhybBhS40542060.2 Rosmarinic Acid C4H medium pass
BhybBhS40542660.1 Rosmarinic Acid C4H medium pass
BhybBhS40543830.1 Rosmarinic Acid C4H low borderline
BhybBhS40544010.1 Rosmarinic Acid C4H low borderline
BhybBhS40544870.1 Rosmarinic Acid C4H low borderline
BhybBhS40547670.1 Rosmarinic Acid C4H low borderline
BhybBhS40548630.2 Rosmarinic Acid C4H low borderline
BhybBhS40549720.1 Rosmarinic Acid C4H low borderline
BhybBhS40550280.1 Rosmarinic Acid C4H medium pass
BhybBhS40550300.1 Rosmarinic Acid C4H medium pass
BhybBhS40550330.1 Rosmarinic Acid C4H medium pass
BhybBhS40550420.1 Rosmarinic Acid C4H medium pass
BhybBhS40551440.1 Rosmarinic Acid C4H low borderline
BhybBhS40552290.1 Rosmarinic Acid C4H low borderline
BhybBhS40553410.1 Rosmarinic Acid C4H low borderline
BhybBhS50558830.1 Rosmarinic Acid C4H low borderline
BhybBhS50562540.2 Rosmarinic Acid C4H low borderline
BhybBhS50562540.3 Rosmarinic Acid C4H low borderline
BhybBhS50567680.1 Rosmarinic Acid C4H medium pass
BhybBhS50571300.1 Rosmarinic Acid C4H low borderline
BhybBhS50573250.1 Rosmarinic Acid C4H medium pass
BhybBhS50573260.1 Rosmarinic Acid C4H medium pass
BhybBhS50573650.1 Rosmarinic Acid C4H low borderline
BhybBhS50573660.1 Rosmarinic Acid C4H medium pass
BhybBhS50578710.1 Rosmarinic Acid C4H low borderline
BhybBhS50578760.1 Rosmarinic Acid C4H medium pass
BhybBhS50579580.1 Rosmarinic Acid C4H low borderline
BhybBhS50581770.1 Rosmarinic Acid C4H low borderline