PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS10399550.9 Rosmarinic Acid C4H low borderline
BhybBhS10401240.1 Rosmarinic Acid C4H low borderline
BhybBhS10406430.1 Rosmarinic Acid C4H low borderline
BhybBhS10408260.1 Rosmarinic Acid C4H medium pass
BhybBhS10411780.1 Rosmarinic Acid C4H low borderline
BhybBhS10411790.1 Rosmarinic Acid C4H medium pass
BhybBhS10411800.1 Rosmarinic Acid C4H medium pass
BhybBhS10412830.1 Rosmarinic Acid C4H low borderline
BhybBhS10413860.1 Rosmarinic Acid C4H low borderline
BhybBhS10413860.2 Rosmarinic Acid C4H low borderline
BhybBhS10414650.1 Rosmarinic Acid C4H low borderline
BhybBhS10415410.1 Rosmarinic Acid C4H low borderline
BhybBhS10421020.1 Rosmarinic Acid C4H low borderline
BhybBhS10421910.1 Rosmarinic Acid C4H medium pass
BhybBhS20445530.1 Rosmarinic Acid C4H low borderline
BhybBhS20447550.1 Rosmarinic Acid C4H low borderline
BhybBhS20448480.1 Rosmarinic Acid C4H low borderline
BhybBhS20449360.1 Rosmarinic Acid C4H low borderline
BhybBhS20450110.1 Rosmarinic Acid C4H low borderline
BhybBhS20455220.1 Rosmarinic Acid C4H low borderline
BhybBhS20461920.1 Rosmarinic Acid C4H low borderline
BhybBhS20464390.1 Rosmarinic Acid C4H low borderline
BhybBhS20464400.1 Rosmarinic Acid C4H low borderline
BhybBhS20464580.1 Rosmarinic Acid C4H low borderline
BhybBhS20464580.2 Rosmarinic Acid C4H low borderline
BhybBhS20467490.1 Rosmarinic Acid C4H low borderline
BhybBhS20468170.1 Rosmarinic Acid C4H low borderline
BhybBhS20468600.1 Rosmarinic Acid C4H medium pass
BhybBhS20472800.1 Rosmarinic Acid C4H low borderline
BhybBhS20473160.1 Rosmarinic Acid C4H medium pass
BhybBhS20474270.1 Rosmarinic Acid C4H low borderline
BhybBhS20475540.1 Rosmarinic Acid C4H low borderline
BhybBhS20476560.1 Rosmarinic Acid C4H low borderline
BhybBhS20476570.1 Rosmarinic Acid C4H medium pass
BhybBhS20478090.1 Rosmarinic Acid C4H medium pass
BhybBhS20479440.1 Rosmarinic Acid C4H low borderline
BhybBhS20480260.1 Rosmarinic Acid C4H low borderline
BhybBhS20484330.1 Rosmarinic Acid C4H low borderline
BhybBhS30487150.1 Rosmarinic Acid C4H medium pass
BhybBhS30487170.1 Rosmarinic Acid C4H low borderline
BhybBhS30487190.1 Rosmarinic Acid C4H low borderline
BhybBhS30488130.1 Rosmarinic Acid C4H low borderline
BhybBhS30491140.1 Rosmarinic Acid C4H low borderline
BhybBhS30495430.1 Rosmarinic Acid C4H low borderline
BhybBhS30498240.1 Rosmarinic Acid C4H medium pass
BhybBhS30498640.1 Rosmarinic Acid C4H low borderline
BhybBhS30501870.1 Rosmarinic Acid C4H low borderline
BhybBhS30505630.1 Rosmarinic Acid C4H low borderline
BhybBhS30505640.1 Rosmarinic Acid C4H low borderline
BhybBhS30505690.1 Rosmarinic Acid C4H medium pass