PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
BhybBhD10010270.1 Alkaloid 7DLGT medium pass
BhybBhD10010290.1 Alkaloid 7DLGT medium pass
BhybBhD10013050.1 Alkaloid 7DLGT low borderline
BhybBhD10013810.1 Alkaloid 7DLGT low borderline
BhybBhD10013820.1 Alkaloid 7DLGT low borderline
BhybBhD10013830.1 Alkaloid 7DLGT low borderline
BhybBhD10013860.1 Alkaloid 7DLGT low borderline
BhybBhD10013870.1 Alkaloid 7DLGT low borderline
BhybBhD10015300.1 Alkaloid 7DLGT low borderline
BhybBhD10023460.1 Alkaloid 7DLGT low borderline
BhybBhD10024410.1 Alkaloid 7DLGT medium pass
BhybBhD10026110.1 Alkaloid 7DLGT medium pass
BhybBhD10027610.1 Alkaloid 7DLGT low borderline
BhybBhD10032110.1 Alkaloid 7DLGT medium pass
BhybBhD10032120.1 Alkaloid 7DLGT medium pass
BhybBhD10034850.1 Alkaloid 7DLGT low borderline
BhybBhD10034870.1 Alkaloid 7DLGT low borderline
BhybBhD10034930.1 Alkaloid 7DLGT medium pass
BhybBhD10035520.1 Alkaloid 7DLGT medium pass
BhybBhD10035520.2 Alkaloid 7DLGT medium pass
BhybBhD10035530.1 Alkaloid 7DLGT medium pass
BhybBhD10035550.1 Alkaloid 7DLGT medium pass
BhybBhD10036720.1 Alkaloid 7DLGT low borderline
BhybBhD10044740.1 Alkaloid 7DLGT low borderline
BhybBhD10044760.1 Alkaloid 7DLGT low borderline
BhybBhD10050110.1 Alkaloid 7DLGT low borderline
BhybBhD10050140.1 Alkaloid 7DLGT low borderline
BhybBhD10050210.1 Alkaloid 7DLGT low borderline
BhybBhD10057050.1 Alkaloid 7DLGT low borderline
BhybBhD10057380.1 Alkaloid 7DLGT low borderline
BhybBhD10057590.1 Alkaloid 7DLGT medium pass
BhybBhD10058980.1 Alkaloid 7DLGT low borderline
BhybBhD10059640.1 Alkaloid 7DLGT low borderline
BhybBhD10060370.1 Alkaloid 7DLGT medium pass
BhybBhD10060930.1 Alkaloid 7DLGT low borderline
BhybBhD10061110.1 Alkaloid 7DLGT low borderline
BhybBhD10062320.1 Alkaloid 7DLGT medium pass
BhybBhD10062320.2 Alkaloid 7DLGT medium pass
BhybBhD10072070.1 Alkaloid 7DLGT medium pass
BhybBhD10072080.1 Alkaloid 7DLGT high pass
BhybBhD10072090.1 Alkaloid 7DLGT medium pass
BhybBhD10072090.2 Alkaloid 7DLGT medium pass
BhybBhD10072100.1 Alkaloid 7DLGT high pass
BhybBhD10072110.1 Alkaloid 7DLGT medium pass
BhybBhD10085130.1 Alkaloid 7DLGT low borderline
BhybBhD10085140.1 Alkaloid 7DLGT low borderline
BhybBhD10085960.1 Alkaloid 7DLGT medium pass
BhybBhD10087380.1 Alkaloid 7DLGT low borderline
BhybBhD10087850.1 Alkaloid 7DLGT medium pass
BhybBhD10096630.1 Alkaloid 7DLGT low borderline