PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhD10096770.1 Alkaloid 7DLGT low borderline
BhybBhD20113430.1 Alkaloid 7DLGT medium pass
BhybBhD20113450.1 Alkaloid 7DLGT low borderline
BhybBhD20113550.1 Alkaloid 7DLGT medium pass
BhybBhD20113570.1 Alkaloid 7DLGT low borderline
BhybBhD20113930.1 Alkaloid 7DLGT low borderline
BhybBhD20113940.1 Alkaloid 7DLGT low borderline
BhybBhD20115330.1 Alkaloid 7DLGT medium pass
BhybBhD20118060.1 Alkaloid 7DLGT low borderline
BhybBhD20118300.1 Alkaloid 7DLGT low borderline
BhybBhD20121620.1 Alkaloid 7DLGT low borderline
BhybBhD20124490.1 Alkaloid 7DLGT low borderline
BhybBhD20131030.1 Alkaloid 7DLGT low borderline
BhybBhD20133480.1 Alkaloid 7DLGT medium pass
BhybBhD20133520.1 Alkaloid 7DLGT medium pass
BhybBhD20133530.1 Alkaloid 7DLGT medium pass
BhybBhD20133540.1 Alkaloid 7DLGT medium pass
BhybBhD20133550.1 Alkaloid 7DLGT medium pass
BhybBhD20133560.1 Alkaloid 7DLGT low borderline
BhybBhD20133740.1 Alkaloid 7DLGT medium pass
BhybBhD20134480.1 Alkaloid 7DLGT medium pass
BhybBhD20135840.1 Alkaloid 7DLGT low borderline
BhybBhD20136500.1 Alkaloid 7DLGT low borderline
BhybBhD20151180.1 Alkaloid 7DLGT medium pass
BhybBhD20151370.1 Alkaloid 7DLGT medium pass
BhybBhD20151380.1 Alkaloid 7DLGT low borderline
BhybBhD20151400.1 Alkaloid 7DLGT low borderline
BhybBhD20152030.1 Alkaloid 7DLGT low borderline
BhybBhD20154820.1 Alkaloid 7DLGT low borderline
BhybBhD20154850.1 Alkaloid 7DLGT low borderline
BhybBhD20165620.1 Alkaloid 7DLGT low borderline
BhybBhD20165640.1 Alkaloid 7DLGT low borderline
BhybBhD20166690.1 Alkaloid 7DLGT low borderline
BhybBhD20166740.1 Alkaloid 7DLGT medium pass
BhybBhD20169820.1 Alkaloid 7DLGT low borderline
BhybBhD20170560.1 Alkaloid 7DLGT low borderline
BhybBhD20172640.1 Alkaloid 7DLGT medium pass
BhybBhD20172650.1 Alkaloid 7DLGT low borderline
BhybBhD20172660.1 Alkaloid 7DLGT medium pass
BhybBhD20172680.1 Alkaloid 7DLGT low borderline
BhybBhD20172700.1 Alkaloid 7DLGT low borderline
BhybBhD20172710.1 Alkaloid 7DLGT medium pass
BhybBhD20172720.1 Alkaloid 7DLGT medium pass
BhybBhD20177430.1 Alkaloid 7DLGT medium pass
BhybBhD20177440.1 Alkaloid 7DLGT low borderline
BhybBhD20181710.1 Alkaloid 7DLGT low borderline
BhybBhD30193230.1 Alkaloid 7DLGT low borderline
BhybBhD30199740.1 Alkaloid 7DLGT low borderline
BhybBhD30201380.1 Alkaloid 7DLGT low borderline
BhybBhD30201600.1 Alkaloid 7DLGT medium pass