PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
BhybBhD10028890.1 Flavonoid ANR medium borderline
BhybBhD10040990.1 Flavonoid ANR medium borderline
BhybBhD10044040.1 Flavonoid ANR medium borderline
BhybBhD10044040.2 Flavonoid ANR medium borderline
BhybBhD10048150.1 Flavonoid ANR medium borderline
BhybBhD10062990.1 Flavonoid ANR medium borderline
BhybBhD10082840.1 Flavonoid ANR low borderline
BhybBhD20109350.1 Flavonoid ANR medium borderline
BhybBhD20126050.1 Flavonoid ANR medium borderline
BhybBhD20126080.1 Flavonoid ANR medium borderline
BhybBhD20127900.1 Flavonoid ANR low borderline
BhybBhD20127900.2 Flavonoid ANR low borderline
BhybBhD20166570.1 Flavonoid ANR medium borderline
BhybBhD20166760.1 Flavonoid ANR low borderline
BhybBhD20166760.2 Flavonoid ANR low borderline
BhybBhD20166760.3 Flavonoid ANR low borderline
BhybBhD30217200.1 Flavonoid ANR low borderline
BhybBhD30217200.2 Flavonoid ANR low borderline
BhybBhD30219670.1 Flavonoid ANR medium borderline
BhybBhD30237650.1 Flavonoid ANR low borderline
BhybBhD30241350.1 Flavonoid ANR medium borderline
BhybBhD40323860.1 Flavonoid ANR high pass
BhybBhD40323880.1 Flavonoid ANR medium borderline
BhybBhD40323890.1 Flavonoid ANR high pass
BhybBhD50370490.1 Flavonoid ANR medium pass
BhybBhD50370510.1 Flavonoid ANR medium borderline
BhybBhD50370520.1 Flavonoid ANR medium borderline
BhybBhS10398880.1 Flavonoid ANR low borderline
BhybBhS10399090.1 Flavonoid ANR medium borderline
BhybBhS10403990.1 Flavonoid ANR medium borderline
BhybBhS10404020.1 Flavonoid ANR medium borderline
BhybBhS10406750.1 Flavonoid ANR medium borderline
BhybBhS10418860.1 Flavonoid ANR medium borderline
BhybBhS20451510.1 Flavonoid ANR low borderline
BhybBhS20466110.1 Flavonoid ANR low borderline
BhybBhS20482650.1 Flavonoid ANR medium borderline
BhybBhS30486960.1 Flavonoid ANR low borderline
BhybBhS30486960.2 Flavonoid ANR low borderline
BhybBhS30494900.1 Flavonoid ANR medium borderline
BhybBhS30498090.4 Flavonoid ANR low borderline
BhybBhS30498090.5 Flavonoid ANR low borderline
BhybBhS30509820.1 Flavonoid ANR low borderline
BhybBhS30512950.1 Flavonoid ANR medium borderline
BhybBhS50576250.1 Flavonoid ANR medium borderline
BhybBhS50576260.1 Flavonoid ANR medium borderline
BhybBhS50576270.1 Flavonoid ANR high pass
BhybBhS60597330.1 Flavonoid ANR medium borderline
BhybBhS60597340.1 Flavonoid ANR medium borderline
BhybBhS60597350.1 Flavonoid ANR medium borderline
BhybBhS60597350.2 Flavonoid ANR medium borderline