PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
BhybBhS60597370.1 Flavonoid ANR medium borderline
BhybBhS70623870.1 Flavonoid ANR medium borderline
BhybBhS70636950.1 Flavonoid ANR medium borderline
BhybBhS70640470.1 Flavonoid ANR medium borderline
BhybBhS80645920.1 Flavonoid ANR low borderline
BhybBhS90695230.1 Flavonoid ANR medium borderline
BhybBhS90695250.1 Flavonoid ANR medium borderline
BhybBhS90695260.1 Flavonoid ANR medium borderline
BhybBhD20134680.1 Flavonoid ANS/LDOX medium borderline
BhybBhD40276740.1 Flavonoid ANS/LDOX medium borderline
BhybBhD40337410.1 Flavonoid ANS/LDOX medium borderline
BhybBhS10397060.1 Flavonoid ANS/LDOX medium borderline
BhybBhS50583120.1 Flavonoid ANS/LDOX low borderline
BhybBhS50588970.1 Flavonoid ANS/LDOX medium borderline
BhybBhS80651440.1 Flavonoid ANS/LDOX medium borderline
BhybBhS90672820.1 Flavonoid ANS/LDOX medium borderline
BhybBhD10050860.1 Flavonoid C4H medium borderline
BhybBhD10050860.2 Flavonoid C4H medium borderline
BhybBhD10050860.3 Flavonoid C4H medium borderline
BhybBhD10050860.4 Flavonoid C4H medium borderline
BhybBhD10102680.1 Flavonoid C4H low borderline
BhybBhD20148480.1 Flavonoid C4H medium borderline
BhybBhD20178410.1 Flavonoid C4H medium borderline
BhybBhD30206470.1 Flavonoid C4H low borderline
BhybBhD30250260.1 Flavonoid C4H medium borderline
BhybBhD40287430.1 Flavonoid C4H medium borderline
BhybBhD40287530.1 Flavonoid C4H medium borderline
BhybBhD50351420.1 Flavonoid C4H medium borderline
BhybBhS10385800.1 Flavonoid C4H medium borderline
BhybBhS10388360.1 Flavonoid C4H medium borderline
BhybBhS20448480.1 Flavonoid C4H low borderline
BhybBhS40532870.1 Flavonoid C4H medium borderline
BhybBhS40542660.1 Flavonoid C4H medium borderline
BhybBhS40544010.1 Flavonoid C4H low borderline
BhybBhS70634490.1 Flavonoid C4H medium borderline
BhybBhS70635150.1 Flavonoid C4H low borderline
BhybBhS90679200.1 Flavonoid C4H medium borderline
BhybBhD10004380.1 Flavonoid CHI medium pass
BhybBhD40280770.2 Flavonoid CHI low borderline
BhybBhD40338490.1 Flavonoid CHI medium pass
BhybBhS100427200.1 Flavonoid CHI low borderline
BhybBhS20482750.1 Flavonoid CHI medium pass
BhybBhS50589550.1 Flavonoid CHI medium pass
BhybBhD10016430.1 Flavonoid CHS medium pass
BhybBhD10033750.1 Flavonoid CHS medium pass
BhybBhD10058090.1 Flavonoid CHS low borderline
BhybBhD10064400.1 Flavonoid CHS medium pass
BhybBhD10064430.1 Flavonoid CHS medium pass
BhybBhD10068200.1 Flavonoid CHS medium pass
BhybBhD10070870.1 Flavonoid CHS medium pass