PlantSME Plant secondary metabolism enzyme database

Citrus clementina (citrus_clementina)

Imported from atlas release summary for Citrus clementina.

2385
Candidate Protein Records
1991
Pathway-Level Records
4984
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 543 19 BAHD (230) View species results
Alkaloid pathway 494 23 7DLGT (91) View species results
Phenylpropanoid pathway 395 11 POD (123) View species results
Flavonoid pathway 251 9 UFGT (153) View species results
Rosmarinic acid pathway 190 7 C4H (77) View species results
Steroid pathway 118 11 CAS (43) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1987 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 346 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Cclescaffold_30063130.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30063200.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30063220.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30066650.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30066660.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30067200.1 Steroid DWF4/CYP90B1 medium borderline
Cclescaffold_30068510.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30073850.1 Steroid DWF4/CYP90B1 medium borderline
Cclescaffold_30075610.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30081410.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30083130.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30083150.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30085860.1 Steroid DWF4/CYP90B1 medium borderline
Cclescaffold_30086610.1 Steroid DWF4/CYP90B1 medium borderline
Cclescaffold_30087560.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30088270.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30088320.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30088340.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30090300.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30100730.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30100730.2 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30100740.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_30102230.1 Steroid DWF4/CYP90B1 medium borderline
Cclescaffold_40105360.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40105370.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40105380.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40105380.2 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40105420.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40105440.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40110790.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40111700.1 Steroid DWF4/CYP90B1 medium borderline
Cclescaffold_40111720.1 Steroid DWF4/CYP90B1 medium borderline
Cclescaffold_40116340.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40116350.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40119810.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40119840.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40119840.2 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40119970.1 Steroid DWF4/CYP90B1 medium borderline
Cclescaffold_40121010.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40121610.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_40127730.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_50134510.1 Steroid DWF4/CYP90B1 medium borderline
Cclescaffold_50138490.1 Steroid DWF4/CYP90B1 medium borderline
Cclescaffold_50143770.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_50145020.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_50145080.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_50147470.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_50150990.1 Steroid DWF4/CYP90B1 low borderline
Cclescaffold_50152470.1 Steroid DWF4/CYP90B1 medium borderline
Cclescaffold_50154060.1 Steroid DWF4/CYP90B1 medium borderline