PlantSME Plant secondary metabolism enzyme database

Climacium americanum (climacium_americanum)

Imported from atlas release summary for Climacium americanum.

877
Candidate Protein Records
648
Pathway-Level Records
1636
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 173 10 POD (95) View species results
Terpenoid pathway 155 19 BAHD (57) View species results
Alkaloid pathway 119 18 NMT (27) View species results
Flavonoid pathway 88 8 UFGT (28) View species results
Rosmarinic acid pathway 73 7 C4H (30) View species results
Steroid pathway 40 12 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 600 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 109 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
CLame656870054020 Alkaloid STR low borderline
CLame656980054800 Alkaloid STR low borderline
CLame657820059210 Alkaloid STR low borderline
CLame658960067470 Alkaloid STR low borderline
CLame659310069210 Alkaloid STR low borderline
CLame659670073000 Alkaloid STR low borderline
CLame660780082840 Alkaloid STR medium pass
CLame660850083870 Alkaloid STR low borderline
CLame661900093480 Alkaloid STR medium pass
CLame661960094540 Alkaloid STR low borderline
CLame664360124050 Alkaloid STR medium pass
CLame664360124100 Alkaloid STR low borderline
CLame664670128170 Alkaloid STR low borderline
CLame665090136850 Alkaloid STR low borderline
CLame665170138910 Alkaloid STR low borderline
CLame665840151660 Alkaloid STR low borderline
CLame666030155270 Alkaloid STR low borderline
CLame666030155280 Alkaloid STR medium pass
CLame666030155630 Alkaloid STR low borderline
CLame666420163560 Alkaloid STR low borderline
CLame666460164660 Alkaloid STR low borderline
CLame666540166560 Alkaloid STR low borderline
CLame666820172040 Alkaloid STR low borderline
CLame667140181370 Alkaloid STR low borderline
CLame667430188980 Alkaloid STR medium pass
CLame667680195930 Alkaloid STR low borderline
CLame667830201140 Alkaloid STR low borderline
CLame668170211330 Alkaloid STR medium pass
CLame668330215050 Alkaloid STR low borderline
CLame668350216240 Alkaloid STR medium pass
CLame668760228010 Alkaloid STR medium pass
CLame668820228810 Alkaloid STR low borderline
CLame656040049970 Alkaloid T16H medium borderline
CLame665280141340 Alkaloid T16H medium borderline
CLame667550192560 Alkaloid T16H medium borderline
CLame667840201780 Alkaloid T16H low borderline
CLame667920203800 Alkaloid T16H medium borderline
CLame668110207810 Alkaloid T16H medium borderline
CLame542720007420 Alkaloid T3O low borderline
CLame656040049900 Alkaloid T3O medium borderline
CLame656390051470 Alkaloid T3O medium pass
CLame656640052160 Alkaloid T3O medium borderline
CLame658330063090 Alkaloid T3O medium borderline
CLame658830066340 Alkaloid T3O medium borderline
CLame659810074340 Alkaloid T3O medium borderline
CLame661600090380 Alkaloid T3O medium borderline
CLame662800104610 Alkaloid T3O medium borderline
CLame662800104660 Alkaloid T3O medium borderline
CLame663220110360 Alkaloid T3O medium borderline
CLame664070120390 Alkaloid T3O medium borderline