PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GbarD03G0004340 Phenylpropanoid CCR medium borderline
GbarD03G0005580 Phenylpropanoid CCR medium borderline
GbarD04G0005730 Phenylpropanoid CCR medium pass
GbarD05G0012080 Phenylpropanoid CCR medium borderline
GbarD05G0019590 Phenylpropanoid CCR medium borderline
GbarD05G0027940 Phenylpropanoid CCR medium pass
GbarD05G0027950 Phenylpropanoid CCR medium borderline
GbarD05G0027970 Phenylpropanoid CCR low borderline
GbarD06G0008700 Phenylpropanoid CCR low borderline
GbarD07G0008060 Phenylpropanoid CCR medium pass
GbarD07G0015910 Phenylpropanoid CCR medium borderline
GbarD07G0015920 Phenylpropanoid CCR medium borderline
GbarD08G0009830 Phenylpropanoid CCR medium borderline
GbarD08G0013430 Phenylpropanoid CCR medium pass
GbarD08G0018340 Phenylpropanoid CCR medium pass
GbarD08G0023090 Phenylpropanoid CCR medium borderline
GbarD09G0003170 Phenylpropanoid CCR medium pass
GbarD10G0013710 Phenylpropanoid CCR low borderline
GbarD10G0018480 Phenylpropanoid CCR low borderline
GbarD12G0005140 Phenylpropanoid CCR medium borderline
GbarA03G0021230 Phenylpropanoid CCoAOMT medium pass
GbarA04G0014410 Phenylpropanoid CCoAOMT medium pass
GbarA04G0016810 Phenylpropanoid CCoAOMT medium pass
GbarA04G0016820 Phenylpropanoid CCoAOMT medium pass
GbarA06G0007610 Phenylpropanoid CCoAOMT medium pass
GbarA08G0027830 Phenylpropanoid CCoAOMT medium pass
GbarA12G0002140 Phenylpropanoid CCoAOMT medium pass
GbarA12G0013490 Phenylpropanoid CCoAOMT medium pass
GbarA13G0004090 Phenylpropanoid CCoAOMT medium pass
GbarD04G0017840 Phenylpropanoid CCoAOMT medium pass
GbarD04G0020290 Phenylpropanoid CCoAOMT medium pass
GbarD04G0020300 Phenylpropanoid CCoAOMT medium pass
GbarD06G0007390 Phenylpropanoid CCoAOMT medium pass
GbarD08G0027780 Phenylpropanoid CCoAOMT medium pass
GbarD12G0002280 Phenylpropanoid CCoAOMT medium pass
GbarD12G0013700 Phenylpropanoid CCoAOMT medium pass
GbarD13G0004060 Phenylpropanoid CCoAOMT medium pass
GbarA01G0020520 Phenylpropanoid COMT medium pass
GbarA02G0003680 Phenylpropanoid COMT low borderline
GbarA03G0018110 Phenylpropanoid COMT medium pass
GbarA03G0018140 Phenylpropanoid COMT medium pass
GbarA03G0018150 Phenylpropanoid COMT medium pass
GbarA04G0008720 Phenylpropanoid COMT medium pass
GbarA04G0015100 Phenylpropanoid COMT medium pass
GbarA04G0015110 Phenylpropanoid COMT medium pass
GbarA04G0015120 Phenylpropanoid COMT medium pass
GbarA05G0007150 Phenylpropanoid COMT medium pass
GbarA06G0015550 Phenylpropanoid COMT medium pass
GbarA07G0017700 Phenylpropanoid COMT medium pass
GbarA08G0006990 Phenylpropanoid COMT low borderline