PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GbarA01G0003580 Alkaloid CODM/T6ODM medium borderline
GbarA01G0003590 Alkaloid CODM/T6ODM medium borderline
GbarA01G0003600 Alkaloid CODM/T6ODM medium borderline
GbarA01G0003710 Alkaloid CODM/T6ODM medium borderline
GbarA01G0004170 Alkaloid CODM/T6ODM medium borderline
GbarA01G0004180 Alkaloid CODM/T6ODM medium borderline
GbarA01G0005740 Alkaloid CODM/T6ODM medium borderline
GbarA01G0007220 Alkaloid CODM/T6ODM medium borderline
GbarA01G0013730 Alkaloid CODM/T6ODM medium borderline
GbarA01G0023400 Alkaloid CODM/T6ODM medium borderline
GbarA01G0024570 Alkaloid CODM/T6ODM medium borderline
GbarA02G0003960 Alkaloid CODM/T6ODM medium borderline
GbarA02G0003970 Alkaloid CODM/T6ODM medium borderline
GbarA02G0003980 Alkaloid CODM/T6ODM medium borderline
GbarA02G0003990 Alkaloid CODM/T6ODM medium borderline
GbarA02G0004030 Alkaloid CODM/T6ODM medium borderline
GbarA02G0004590 Alkaloid CODM/T6ODM medium borderline
GbarA02G0014930 Alkaloid CODM/T6ODM medium borderline
GbarA03G0012960 Alkaloid CODM/T6ODM medium borderline
GbarA03G0013870 Alkaloid CODM/T6ODM medium borderline
GbarA04G0010250 Alkaloid CODM/T6ODM medium borderline
GbarA05G0001320 Alkaloid CODM/T6ODM medium borderline
GbarA05G0004890 Alkaloid CODM/T6ODM low borderline
GbarA05G0016880 Alkaloid CODM/T6ODM medium borderline
GbarA05G0022250 Alkaloid CODM/T6ODM medium borderline
GbarA05G0034500 Alkaloid CODM/T6ODM medium borderline
GbarA05G0036740 Alkaloid CODM/T6ODM medium borderline
GbarA06G0005530 Alkaloid CODM/T6ODM medium borderline
GbarA06G0005540 Alkaloid CODM/T6ODM medium borderline
GbarA06G0005550 Alkaloid CODM/T6ODM medium borderline
GbarA06G0005560 Alkaloid CODM/T6ODM medium borderline
GbarA06G0005570 Alkaloid CODM/T6ODM medium borderline
GbarA06G0005660 Alkaloid CODM/T6ODM medium borderline
GbarA06G0021500 Alkaloid CODM/T6ODM medium borderline
GbarA06G0022440 Alkaloid CODM/T6ODM medium borderline
GbarA07G0001120 Alkaloid CODM/T6ODM medium borderline
GbarA07G0004430 Alkaloid CODM/T6ODM medium borderline
GbarA07G0004640 Alkaloid CODM/T6ODM medium borderline
GbarA07G0005040 Alkaloid CODM/T6ODM medium borderline
GbarA07G0015740 Alkaloid CODM/T6ODM medium borderline
GbarA07G0023910 Alkaloid CODM/T6ODM medium borderline
GbarA08G0000650 Alkaloid CODM/T6ODM medium borderline
GbarA08G0005630 Alkaloid CODM/T6ODM medium borderline
GbarA08G0012910 Alkaloid CODM/T6ODM medium borderline
GbarA08G0020260 Alkaloid CODM/T6ODM medium borderline
GbarA08G0025370 Alkaloid CODM/T6ODM medium borderline
GbarA08G0025380 Alkaloid CODM/T6ODM medium borderline
GbarA08G0025390 Alkaloid CODM/T6ODM medium borderline
GbarA09G0004690 Alkaloid CODM/T6ODM medium borderline
GbarA09G0007660 Alkaloid CODM/T6ODM medium borderline