PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GbarA12G0028460 Steroid BR6OX1/CYP85A1 medium borderline
GbarA12G0028470 Steroid BR6OX1/CYP85A1 medium borderline
GbarA13G0000650 Steroid BR6OX1/CYP85A1 low borderline
GbarA13G0003970 Steroid BR6OX1/CYP85A1 medium borderline
GbarA13G0014280 Steroid BR6OX1/CYP85A1 medium borderline
GbarD02G0023000 Steroid BR6OX1/CYP85A1 medium borderline
GbarD05G0004210 Steroid BR6OX1/CYP85A1 medium borderline
GbarD05G0020240 Steroid BR6OX1/CYP85A1 low borderline
GbarD05G0020630 Steroid BR6OX1/CYP85A1 medium borderline
GbarD06G0000610 Steroid BR6OX1/CYP85A1 medium borderline
GbarD06G0001180 Steroid BR6OX1/CYP85A1 medium borderline
GbarD06G0001310 Steroid BR6OX1/CYP85A1 low borderline
GbarD06G0012530 Steroid BR6OX1/CYP85A1 medium borderline
GbarD07G0005790 Steroid BR6OX1/CYP85A1 medium borderline
GbarD08G0017670 Steroid BR6OX1/CYP85A1 medium borderline
GbarD10G0024610 Steroid BR6OX1/CYP85A1 medium borderline
GbarD12G0022300 Steroid BR6OX1/CYP85A1 medium borderline
GbarD12G0024230 Steroid BR6OX1/CYP85A1 medium borderline
GbarD12G0028700 Steroid BR6OX1/CYP85A1 medium borderline
GbarD12G0028710 Steroid BR6OX1/CYP85A1 medium borderline
GbarD13G0000590 Steroid BR6OX1/CYP85A1 low borderline
GbarD13G0003940 Steroid BR6OX1/CYP85A1 medium borderline
Gbarscaffold3739_obj0004240 Steroid BR6OX1/CYP85A1 low borderline
GbarA01G0003960 Steroid BR6OX2/CYP85A2 low borderline
GbarA01G0003970 Steroid BR6OX2/CYP85A2 low borderline
GbarA01G0003980 Steroid BR6OX2/CYP85A2 low borderline
GbarA01G0006250 Steroid BR6OX2/CYP85A2 low borderline
GbarA01G0008500 Steroid BR6OX2/CYP85A2 low borderline
GbarA01G0009120 Steroid BR6OX2/CYP85A2 low borderline
GbarA01G0011560 Steroid BR6OX2/CYP85A2 low borderline
GbarA01G0021200 Steroid BR6OX2/CYP85A2 low borderline
GbarA02G0002480 Steroid BR6OX2/CYP85A2 low borderline
GbarA02G0002500 Steroid BR6OX2/CYP85A2 low borderline
GbarA02G0002530 Steroid BR6OX2/CYP85A2 low borderline
GbarA02G0002550 Steroid BR6OX2/CYP85A2 low borderline
GbarA02G0009000 Steroid BR6OX2/CYP85A2 low borderline
GbarA02G0010880 Steroid BR6OX2/CYP85A2 low borderline
GbarA02G0016010 Steroid BR6OX2/CYP85A2 low borderline
GbarA03G0001980 Steroid BR6OX2/CYP85A2 low borderline
GbarA03G0006170 Steroid BR6OX2/CYP85A2 low borderline
GbarA03G0012330 Steroid BR6OX2/CYP85A2 low borderline
GbarA04G0005240 Steroid BR6OX2/CYP85A2 low borderline
GbarA04G0012910 Steroid BR6OX2/CYP85A2 low borderline
GbarA04G0016830 Steroid BR6OX2/CYP85A2 low borderline
GbarA05G0001930 Steroid BR6OX2/CYP85A2 low borderline
GbarA05G0008410 Steroid BR6OX2/CYP85A2 low borderline
GbarA05G0009010 Steroid BR6OX2/CYP85A2 low borderline
GbarA05G0009810 Steroid BR6OX2/CYP85A2 low borderline
GbarA05G0018780 Steroid BR6OX2/CYP85A2 low borderline
GbarA05G0019770 Steroid BR6OX2/CYP85A2 low borderline