PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
GbarD01G0004090 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD01G0005610 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD01G0007200 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD01G0014510 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD01G0014520 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD01G0014530 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD01G0024180 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD01G0025330 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD02G0004170 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD02G0004700 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD02G0014840 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD02G0015420 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD03G0001470 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD03G0007160 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD03G0008370 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD03G0008380 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD04G0002390 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD04G0006670 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD04G0007110 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD04G0013560 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD05G0001360 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD05G0017190 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD05G0022510 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD06G0005340 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD06G0021840 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD06G0022830 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD07G0001190 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD07G0004450 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD07G0004650 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD07G0005080 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD07G0009380 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD08G0012590 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD08G0019390 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD08G0020390 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD08G0025410 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD09G0000050 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD09G0005320 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD09G0007060 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD09G0007090 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD09G0007100 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD09G0007110 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD09G0010230 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD09G0012070 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD09G0017670 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD09G0018960 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD09G0023990 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD09G0024000 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
GbarD09G0024010 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD09G0024020 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
GbarD09G0024030 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO