PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GbarD02G0014760 Alkaloid COR medium pass
GbarD02G0015130 Alkaloid COR medium pass
GbarD02G0018160 Alkaloid COR medium pass
GbarD02G0018170 Alkaloid COR medium pass
GbarD02G0018180 Alkaloid COR medium pass
GbarD03G0012250 Alkaloid COR medium pass
GbarD04G0013750 Alkaloid COR medium pass
GbarD04G0013760 Alkaloid COR medium pass
GbarD04G0013780 Alkaloid COR medium pass
GbarD04G0013790 Alkaloid COR medium pass
GbarD04G0018210 Alkaloid COR medium pass
GbarD04G0020050 Alkaloid COR medium pass
GbarD09G0016510 Alkaloid COR medium pass
GbarD09G0016520 Alkaloid COR medium pass
GbarD11G0037610 Alkaloid COR medium pass
GbarD12G0017400 Alkaloid COR medium pass
GbarD13G0000720 Alkaloid COR medium pass
GbarD13G0000740 Alkaloid COR medium pass
GbarD13G0000750 Alkaloid COR medium pass
GbarA03G0013510 Alkaloid CYP719 medium borderline
GbarA06G0023340 Alkaloid CYP719 medium borderline
GbarA07G0013910 Alkaloid CYP719 medium borderline
GbarA07G0020780 Alkaloid CYP719 low borderline
GbarA08G0015410 Alkaloid CYP719 medium borderline
GbarA09G0008570 Alkaloid CYP719 medium borderline
GbarA10G0001370 Alkaloid CYP719 medium borderline
GbarA11G0016120 Alkaloid CYP719 low borderline
GbarA11G0034500 Alkaloid CYP719 medium borderline
GbarD07G0020560 Alkaloid CYP719 low borderline
GbarD08G0025150 Alkaloid CYP719 medium borderline
GbarD10G0001480 Alkaloid CYP719 medium borderline
GbarD12G0017890 Alkaloid CYP719 medium borderline
GbarD13G0009450 Alkaloid CYP719 medium borderline
GbarD13G0009470 Alkaloid CYP719 medium borderline
GbarA04G0001900 Alkaloid CYP80B1 medium pass
GbarA04G0001920 Alkaloid CYP80B1 medium borderline
GbarA06G0001340 Alkaloid CYP80B1 medium borderline
GbarA06G0001390 Alkaloid CYP80B1 medium borderline
GbarA08G0025080 Alkaloid CYP80B1 medium borderline
GbarA11G0000720 Alkaloid CYP80B1 medium borderline
GbarA11G0000730 Alkaloid CYP80B1 medium borderline
GbarA11G0000740 Alkaloid CYP80B1 medium borderline
GbarA11G0019700 Alkaloid CYP80B1 medium borderline
GbarA12G0007980 Alkaloid CYP80B1 medium borderline
GbarD07G0021260 Alkaloid CYP80B1 medium borderline
GbarD11G0000770 Alkaloid CYP80B1 medium borderline
Gbarscaffold1817_obj_A060001490 Alkaloid CYP80B1 medium borderline
GbarA01G0021850 Alkaloid CYP80F1 low borderline
GbarA03G0023440 Alkaloid CYP80F1 low borderline
GbarA09G0021600 Alkaloid CYP80F1 medium borderline