PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GbarD12G0017610 Alkaloid STR medium pass
GbarD12G0019110 Alkaloid STR medium pass
GbarD12G0022360 Alkaloid STR low borderline
GbarD12G0029280 Alkaloid STR medium pass
GbarD13G0002180 Alkaloid STR low borderline
GbarD13G0010350 Alkaloid STR low borderline
GbarD13G0020350 Alkaloid STR low borderline
GbarD13G0021740 Alkaloid STR medium pass
GbarD13G0025830 Alkaloid STR low borderline
Gbarscaffold311_obj0003460 Alkaloid STR low borderline
Gbarscaffold509_obj_A090005990 Alkaloid STR medium pass
GbarA01G0005240 Alkaloid T16H low borderline
GbarA01G0005250 Alkaloid T16H low borderline
GbarA01G0008550 Alkaloid T16H medium borderline
GbarA01G0017490 Alkaloid T16H low borderline
GbarA02G0018290 Alkaloid T16H medium borderline
GbarA03G0001970 Alkaloid T16H low borderline
GbarA03G0008940 Alkaloid T16H medium borderline
GbarA03G0017580 Alkaloid T16H medium borderline
GbarA04G0001870 Alkaloid T16H medium borderline
GbarA05G0013640 Alkaloid T16H medium borderline
GbarA05G0018780 Alkaloid T16H medium borderline
GbarA05G0019810 Alkaloid T16H medium borderline
GbarA05G0019900 Alkaloid T16H medium borderline
GbarA05G0029630 Alkaloid T16H medium borderline
GbarA05G0030620 Alkaloid T16H low borderline
GbarA06G0001410 Alkaloid T16H medium borderline
GbarA06G0001470 Alkaloid T16H medium borderline
GbarA06G0002270 Alkaloid T16H medium borderline
GbarA07G0006250 Alkaloid T16H medium borderline
GbarA07G0006270 Alkaloid T16H medium borderline
GbarA07G0010200 Alkaloid T16H medium borderline
GbarA07G0010210 Alkaloid T16H medium borderline
GbarA07G0013180 Alkaloid T16H medium borderline
GbarA08G0018430 Alkaloid T16H medium borderline
GbarA09G0001870 Alkaloid T16H medium borderline
GbarA10G0019440 Alkaloid T16H medium borderline
GbarA10G0021110 Alkaloid T16H medium borderline
GbarA10G0021690 Alkaloid T16H medium borderline
GbarA10G0026180 Alkaloid T16H medium borderline
GbarA11G0000750 Alkaloid T16H medium borderline
GbarA11G0003780 Alkaloid T16H medium borderline
GbarA11G0024780 Alkaloid T16H medium borderline
GbarA12G0002790 Alkaloid T16H low borderline
GbarA12G0009650 Alkaloid T16H medium borderline
GbarA12G0015910 Alkaloid T16H medium borderline
GbarA12G0016500 Alkaloid T16H medium borderline
GbarA12G0020490 Alkaloid T16H medium borderline
GbarA12G0020990 Alkaloid T16H medium borderline
GbarA12G0027700 Alkaloid T16H medium borderline