PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GbarD12G0027670 Flavonoid UFGT medium pass
GbarD13G0001900 Flavonoid UFGT medium pass
GbarD13G0004130 Flavonoid UFGT medium pass
GbarD13G0004140 Flavonoid UFGT medium pass
GbarD13G0004150 Flavonoid UFGT high pass
GbarD13G0005440 Flavonoid UFGT medium pass
GbarD13G0005450 Flavonoid UFGT medium pass
GbarD13G0005480 Flavonoid UFGT low borderline
GbarD13G0008230 Flavonoid UFGT medium pass
GbarD13G0017820 Flavonoid UFGT medium pass
GbarD13G0025200 Flavonoid UFGT medium pass
GbarD13G0026170 Flavonoid UFGT high pass
GbarD13G0026180 Flavonoid UFGT medium pass
GbarD13G0026190 Flavonoid UFGT medium pass
Gbarscaffold46648_obj_D010005470 Flavonoid UFGT medium pass
Gbarscaffold8868_obj_D060007590 Flavonoid UFGT high pass
GbarA01G0002400 Phenylpropanoid 4CL low borderline
GbarA01G0002410 Phenylpropanoid 4CL low borderline
GbarA01G0010510 Phenylpropanoid 4CL medium pass
GbarA01G0016790 Phenylpropanoid 4CL medium pass
GbarA01G0019670 Phenylpropanoid 4CL low borderline
GbarA02G0005560 Phenylpropanoid 4CL medium pass
GbarA02G0005570 Phenylpropanoid 4CL medium pass
GbarA02G0005580 Phenylpropanoid 4CL medium pass
GbarA02G0009780 Phenylpropanoid 4CL medium pass
GbarA02G0009850 Phenylpropanoid 4CL medium pass
GbarA02G0011290 Phenylpropanoid 4CL low borderline
GbarA02G0012550 Phenylpropanoid 4CL medium pass
GbarA02G0012730 Phenylpropanoid 4CL medium pass
GbarA02G0016540 Phenylpropanoid 4CL medium pass
GbarA02G0020290 Phenylpropanoid 4CL medium pass
GbarA02G0020330 Phenylpropanoid 4CL medium pass
GbarA03G0000080 Phenylpropanoid 4CL medium pass
GbarA03G0004000 Phenylpropanoid 4CL medium pass
GbarA03G0014590 Phenylpropanoid 4CL medium pass
GbarA04G0015210 Phenylpropanoid 4CL medium pass
GbarA05G0000510 Phenylpropanoid 4CL medium pass
GbarA05G0011160 Phenylpropanoid 4CL low borderline
GbarA05G0014390 Phenylpropanoid 4CL medium pass
GbarA05G0023480 Phenylpropanoid 4CL medium pass
GbarA05G0033200 Phenylpropanoid 4CL low borderline
GbarA05G0042560 Phenylpropanoid 4CL low borderline
GbarA05G0042990 Phenylpropanoid 4CL medium pass
GbarA06G0004870 Phenylpropanoid 4CL low borderline
GbarA06G0020800 Phenylpropanoid 4CL low borderline
GbarA07G0005910 Phenylpropanoid 4CL medium pass
GbarA07G0005920 Phenylpropanoid 4CL medium pass
GbarA07G0009650 Phenylpropanoid 4CL low borderline
GbarA07G0014070 Phenylpropanoid 4CL low borderline
GbarA08G0017810 Phenylpropanoid 4CL medium pass