PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GbarD08G0018020 Phenylpropanoid 4CL medium pass
GbarD08G0020870 Phenylpropanoid 4CL medium pass
GbarD09G0006780 Phenylpropanoid 4CL low borderline
GbarD09G0007830 Phenylpropanoid 4CL medium pass
GbarD09G0015800 Phenylpropanoid 4CL medium pass
GbarD09G0021340 Phenylpropanoid 4CL medium pass
GbarD09G0025980 Phenylpropanoid 4CL medium pass
GbarD10G0005250 Phenylpropanoid 4CL medium pass
GbarD10G0007300 Phenylpropanoid 4CL medium pass
GbarD10G0014900 Phenylpropanoid 4CL low borderline
GbarD10G0015610 Phenylpropanoid 4CL medium pass
GbarD10G0019620 Phenylpropanoid 4CL medium pass
GbarD11G0002430 Phenylpropanoid 4CL low borderline
GbarD11G0004030 Phenylpropanoid 4CL medium pass
GbarD11G0018140 Phenylpropanoid 4CL medium pass
GbarD11G0033840 Phenylpropanoid 4CL low borderline
GbarD12G0016760 Phenylpropanoid 4CL medium pass
GbarD13G0009310 Phenylpropanoid 4CL low borderline
GbarD13G0020080 Phenylpropanoid 4CL medium pass
GbarD13G0025990 Phenylpropanoid 4CL medium pass
Gbarscaffold257_obj_D020002830 Phenylpropanoid 4CL medium pass
GbarA01G0003960 Phenylpropanoid C3'H/CYP98A low borderline
GbarA01G0003970 Phenylpropanoid C3'H/CYP98A low borderline
GbarA01G0003980 Phenylpropanoid C3'H/CYP98A low borderline
GbarA01G0006250 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0006260 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0007610 Phenylpropanoid C3'H/CYP98A low borderline
GbarA01G0008440 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0008450 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0008480 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0008500 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0008520 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0008540 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0008560 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0009120 Phenylpropanoid C3'H/CYP98A low borderline
GbarA01G0011560 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0021190 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0021200 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0021420 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0022470 Phenylpropanoid C3'H/CYP98A low borderline
GbarA02G0000510 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA02G0002480 Phenylpropanoid C3'H/CYP98A low borderline
GbarA02G0002530 Phenylpropanoid C3'H/CYP98A low borderline
GbarA02G0002550 Phenylpropanoid C3'H/CYP98A low borderline
GbarA02G0002570 Phenylpropanoid C3'H/CYP98A low borderline
GbarA02G0006960 Phenylpropanoid C3'H/CYP98A low borderline
GbarA02G0009000 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA02G0009030 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA02G0010880 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA02G0013670 Phenylpropanoid C3'H/CYP98A low borderline