PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
GbarD04G0011280 Alkaloid 7DLH medium borderline
GbarD04G0020940 Alkaloid 7DLH medium borderline
GbarD04G0020950 Alkaloid 7DLH medium borderline
GbarD05G0006430 Alkaloid 7DLH medium borderline
GbarD05G0019930 Alkaloid 7DLH medium borderline
GbarD05G0032320 Alkaloid 7DLH low borderline
GbarD07G0011100 Alkaloid 7DLH medium borderline
GbarD07G0020050 Alkaloid 7DLH medium borderline
GbarD07G0020690 Alkaloid 7DLH medium borderline
GbarD08G0015980 Alkaloid 7DLH medium borderline
GbarD08G0021130 Alkaloid 7DLH medium borderline
GbarD08G0026590 Alkaloid 7DLH medium borderline
GbarD09G0019120 Alkaloid 7DLH medium borderline
GbarD10G0015390 Alkaloid 7DLH medium borderline
GbarD10G0018030 Alkaloid 7DLH low borderline
GbarD11G0017390 Alkaloid 7DLH medium borderline
GbarD11G0023990 Alkaloid 7DLH medium borderline
GbarD11G0037160 Alkaloid 7DLH medium borderline
GbarD12G0005490 Alkaloid 7DLH medium borderline
GbarD12G0011440 Alkaloid 7DLH medium borderline
GbarD12G0025040 Alkaloid 7DLH medium borderline
GbarD12G0027970 Alkaloid 7DLH medium borderline
GbarD13G0003690 Alkaloid 7DLH medium borderline
GbarD13G0003700 Alkaloid 7DLH medium borderline
GbarD13G0003730 Alkaloid 7DLH medium borderline
GbarD13G0006340 Alkaloid 7DLH low borderline
GbarD13G0006490 Alkaloid 7DLH medium borderline
GbarD13G0008810 Alkaloid 7DLH medium borderline
GbarD13G0008820 Alkaloid 7DLH medium borderline
GbarD13G0008840 Alkaloid 7DLH medium borderline
GbarA01G0010550 Alkaloid 8HGO medium borderline
GbarA01G0020580 Alkaloid 8HGO medium borderline
GbarA02G0007130 Alkaloid 8HGO medium borderline
GbarA02G0015020 Alkaloid 8HGO medium borderline
GbarA04G0006720 Alkaloid 8HGO medium borderline
GbarA06G0003620 Alkaloid 8HGO medium borderline
GbarA06G0003640 Alkaloid 8HGO medium borderline
GbarA07G0016690 Alkaloid 8HGO medium borderline
GbarA07G0023020 Alkaloid 8HGO medium borderline
GbarA08G0012830 Alkaloid 8HGO medium borderline
GbarA08G0025830 Alkaloid 8HGO medium borderline
GbarA10G0023950 Alkaloid 8HGO medium borderline
GbarA11G0005890 Alkaloid 8HGO medium borderline
GbarA11G0005900 Alkaloid 8HGO medium borderline
GbarA11G0022850 Alkaloid 8HGO medium pass
GbarD01G0010940 Alkaloid 8HGO medium borderline
GbarD01G0021590 Alkaloid 8HGO medium borderline
GbarD02G0007280 Alkaloid 8HGO medium borderline
GbarD03G0005710 Alkaloid 8HGO medium borderline
GbarD06G0003460 Alkaloid 8HGO medium borderline