PlantSME Plant secondary metabolism enzyme database

Gossypium hirsutum (gossypium_hirsutum)

Imported from atlas release summary for Gossypium hirsutum.

5656
Candidate Protein Records
4579
Pathway-Level Records
11461
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1367 21 BAHD (612) View species results
Alkaloid pathway 1056 25 NMT (183) View species results
Phenylpropanoid pathway 975 12 POD (389) View species results
Flavonoid pathway 507 11 UFGT (306) View species results
Rosmarinic acid pathway 363 7 C4H (130) View species results
Steroid pathway 311 12 CAS (159) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4387 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 960 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Protein/Isoform Record Pathway Family Confidence Status
GhirA13G0014860.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA13G0014960.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA13G0026100.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD01G0004280.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD01G0004280.2 Steroid BR6OX2/CYP85A2 low borderline
GhirD01G0004290.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD01G0004310.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD01G0004310.2 Steroid BR6OX2/CYP85A2 low borderline
GhirD01G0004320.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD01G0006850.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD01G0009470.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD01G0013400.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD01G0018630.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD01G0024450.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003340.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003350.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003360.3 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003370.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003400.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003430.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003450.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003460.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003460.2 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003470.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003510.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003520.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0003560.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0010450.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD02G0015240.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD03G0005170.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD03G0010050.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD03G0012000.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD03G0013770.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD03G0018280.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD04G0017830.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD04G0022210.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0009060.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0009710.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0010560.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0016320.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0020530.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0021630.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0021640.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0021660.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0028580.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0034380.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0038300.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD05G0042640.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD06G0001380.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD06G0006570.1 Steroid BR6OX2/CYP85A2 low borderline