PlantSME Plant secondary metabolism enzyme database

Gossypium hirsutum (gossypium_hirsutum)

Imported from atlas release summary for Gossypium hirsutum.

5656
Candidate Protein Records
4579
Pathway-Level Records
11461
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1367 21 BAHD (612) View species results
Alkaloid pathway 1056 25 NMT (183) View species results
Phenylpropanoid pathway 975 12 POD (389) View species results
Flavonoid pathway 507 11 UFGT (306) View species results
Rosmarinic acid pathway 363 7 C4H (130) View species results
Steroid pathway 311 12 CAS (159) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4387 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 960 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Protein/Isoform Record Pathway Family Confidence Status
GhirD06G0008880.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD06G0018110.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD06G0021910.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD06G0021910.2 Steroid BR6OX2/CYP85A2 low borderline
GhirD07G0000350.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD07G0011990.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD07G0022490.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD07G0023040.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD07G0023050.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD07G0023060.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD07G0024600.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD08G0000920.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD08G0013370.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD08G0015600.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD08G0015600.2 Steroid BR6OX2/CYP85A2 low borderline
GhirD08G0016510.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD08G0021010.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD08G0021330.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD08G0022170.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD08G0022850.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD08G0026550.1 Steroid BR6OX2/CYP85A2 medium borderline
GhirD08G0028050.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD09G0003360.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD09G0003370.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD09G0003380.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD09G0005760.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD09G0005770.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD09G0005800.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD09G0011200.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD09G0014380.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD09G0014390.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD09G0022250.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD10G0006240.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD10G0016280.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD10G0021420.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD10G0021670.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD10G0021680.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD10G0023330.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD10G0023810.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD10G0023910.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD10G0028560.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD10G0028570.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD10G0028580.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD11G0000820.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD11G0010240.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD11G0011380.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD11G0024460.1 Steroid BR6OX2/CYP85A2 medium borderline
GhirD11G0026090.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD12G0009780.1 Steroid BR6OX2/CYP85A2 low borderline
GhirD12G0010250.1 Steroid BR6OX2/CYP85A2 low borderline