PlantSME Plant secondary metabolism enzyme database

Gossypium hirsutum (gossypium_hirsutum)

Imported from atlas release summary for Gossypium hirsutum.

4579
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1367 21 BAHD (612) View species results
Alkaloid pathway 1056 25 NMT (183) View species results
Phenylpropanoid pathway 975 12 POD (389) View species results
Flavonoid pathway 507 11 UFGT (306) View species results
Rosmarinic acid pathway 363 7 C4H (130) View species results
Steroid pathway 311 12 CAS (159) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4387 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 960 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
GhirA07G0020870.1 Steroid DWF4/CYP90B1 low borderline
GhirA07G0023830.1 Steroid DWF4/CYP90B1 low borderline
GhirA07G0023840.1 Steroid DWF4/CYP90B1 low borderline
GhirA08G0000940.1 Steroid DWF4/CYP90B1 low borderline
GhirA08G0002100.1 Steroid DWF4/CYP90B1 medium borderline
GhirA08G0014740.1 Steroid DWF4/CYP90B1 low borderline
GhirA08G0014740.2 Steroid DWF4/CYP90B1 low borderline
GhirA08G0017860.4 Steroid DWF4/CYP90B1 medium borderline
GhirA08G0017860.5 Steroid DWF4/CYP90B1 medium borderline
GhirA08G0019630.1 Steroid DWF4/CYP90B1 low borderline
GhirA08G0024940.1 Steroid DWF4/CYP90B1 low borderline
GhirA09G0004460.1 Steroid DWF4/CYP90B1 low borderline
GhirA09G0019950.1 Steroid DWF4/CYP90B1 low borderline
GhirA09G0021930.1 Steroid DWF4/CYP90B1 low borderline
GhirA09G0022700.1 Steroid DWF4/CYP90B1 low borderline
GhirA10G0001510.1 Steroid DWF4/CYP90B1 low borderline
GhirA10G0021250.1 Steroid DWF4/CYP90B1 low borderline
GhirA10G0021280.1 Steroid DWF4/CYP90B1 low borderline
GhirA10G0021280.2 Steroid DWF4/CYP90B1 low borderline
GhirA10G0021290.1 Steroid DWF4/CYP90B1 low borderline
GhirA10G0021310.1 Steroid DWF4/CYP90B1 low borderline
GhirA10G0021760.1 Steroid DWF4/CYP90B1 low borderline
GhirA10G0021920.1 Steroid DWF4/CYP90B1 low borderline
GhirA10G0023730.1 Steroid DWF4/CYP90B1 low borderline
GhirA11G0009170.1 Steroid DWF4/CYP90B1 low borderline
GhirA11G0009180.1 Steroid DWF4/CYP90B1 low borderline
GhirA11G0009190.1 Steroid DWF4/CYP90B1 low borderline
GhirA11G0009190.2 Steroid DWF4/CYP90B1 low borderline
GhirA11G0016100.1 Steroid DWF4/CYP90B1 medium borderline
GhirA11G0017720.1 Steroid DWF4/CYP90B1 low borderline
GhirA11G0020440.1 Steroid DWF4/CYP90B1 low borderline
GhirA11G0023710.1 Steroid DWF4/CYP90B1 low borderline
GhirA11G0025830.1 Steroid DWF4/CYP90B1 medium borderline
GhirA11G0033030.1 Steroid DWF4/CYP90B1 low borderline
GhirA11G0033950.1 Steroid DWF4/CYP90B1 low borderline
GhirA11G0036230.1 Steroid DWF4/CYP90B1 low borderline
GhirA12G0005930.1 Steroid DWF4/CYP90B1 low borderline
GhirA12G0006170.1 Steroid DWF4/CYP90B1 low borderline
GhirA12G0008260.1 Steroid DWF4/CYP90B1 low borderline
GhirA12G0018200.1 Steroid DWF4/CYP90B1 low borderline
GhirA12G0020200.1 Steroid DWF4/CYP90B1 low borderline
GhirA12G0028260.1 Steroid DWF4/CYP90B1 low borderline
GhirA12G0029040.1 Steroid DWF4/CYP90B1 low borderline
GhirA13G0002390.1 Steroid DWF4/CYP90B1 low borderline
GhirA13G0008610.1 Steroid DWF4/CYP90B1 medium borderline
GhirA13G0010940.1 Steroid DWF4/CYP90B1 low borderline
GhirA13G0013800.1 Steroid DWF4/CYP90B1 low borderline
GhirA13G0022260.1 Steroid DWF4/CYP90B1 low borderline
GhirD01G0005750.1 Steroid DWF4/CYP90B1 medium borderline
GhirD01G0006860.1 Steroid DWF4/CYP90B1 low borderline