PlantSME Plant secondary metabolism enzyme database

Gossypium hirsutum (gossypium_hirsutum)

Imported from atlas release summary for Gossypium hirsutum.

4579
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1367 21 BAHD (612) View species results
Alkaloid pathway 1056 25 NMT (183) View species results
Phenylpropanoid pathway 975 12 POD (389) View species results
Flavonoid pathway 507 11 UFGT (306) View species results
Rosmarinic acid pathway 363 7 C4H (130) View species results
Steroid pathway 311 12 CAS (159) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4387 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 960 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
GhirD01G0006870.1 Steroid DWF4/CYP90B1 low borderline
GhirD01G0009400.1 Steroid DWF4/CYP90B1 low borderline
GhirD01G0009430.1 Steroid DWF4/CYP90B1 low borderline
GhirD01G0009490.1 Steroid DWF4/CYP90B1 low borderline
GhirD01G0023230.1 Steroid DWF4/CYP90B1 low borderline
GhirD02G0008280.1 Steroid DWF4/CYP90B1 medium borderline
GhirD02G0010480.1 Steroid DWF4/CYP90B1 low borderline
GhirD02G0018540.1 Steroid DWF4/CYP90B1 low borderline
GhirD02G0025000.1 Steroid DWF4/CYP90B1 medium borderline
GhirD03G0002560.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0002590.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0002600.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0002900.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0005660.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0006330.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0012020.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0013450.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0014480.1 Steroid DWF4/CYP90B1 medium borderline
GhirD03G0017910.1 Steroid DWF4/CYP90B1 medium borderline
GhirD03G0018210.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0018210.2 Steroid DWF4/CYP90B1 low borderline
GhirD03G0018220.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0018230.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0018240.1 Steroid DWF4/CYP90B1 low borderline
GhirD03G0018270.1 Steroid DWF4/CYP90B1 low borderline
GhirD04G0001470.1 Steroid DWF4/CYP90B1 medium borderline
GhirD04G0001470.2 Steroid DWF4/CYP90B1 medium borderline
GhirD04G0004630.1 Steroid DWF4/CYP90B1 medium borderline
GhirD04G0007090.1 Steroid DWF4/CYP90B1 medium borderline
GhirD04G0012440.1 Steroid DWF4/CYP90B1 low borderline
GhirD04G0012450.1 Steroid DWF4/CYP90B1 low borderline
GhirD04G0020120.1 Steroid DWF4/CYP90B1 low borderline
GhirD05G0003650.1 Steroid DWF4/CYP90B1 low borderline
GhirD05G0007450.1 Steroid DWF4/CYP90B1 low borderline
GhirD05G0012560.1 Steroid DWF4/CYP90B1 medium borderline
GhirD05G0016330.1 Steroid DWF4/CYP90B1 low borderline
GhirD05G0021360.1 Steroid DWF4/CYP90B1 medium borderline
GhirD05G0021360.2 Steroid DWF4/CYP90B1 medium borderline
GhirD05G0021360.3 Steroid DWF4/CYP90B1 medium borderline
GhirD05G0021670.1 Steroid DWF4/CYP90B1 low borderline
GhirD05G0022660.1 Steroid DWF4/CYP90B1 low borderline
GhirD05G0028800.1 Steroid DWF4/CYP90B1 low borderline
GhirD05G0032300.1 Steroid DWF4/CYP90B1 low borderline
GhirD06G0001410.1 Steroid DWF4/CYP90B1 low borderline
GhirD06G0002350.1 Steroid DWF4/CYP90B1 low borderline
GhirD06G0002350.2 Steroid DWF4/CYP90B1 low borderline
GhirD06G0016820.1 Steroid DWF4/CYP90B1 low borderline
GhirD06G0024930.1 Steroid DWF4/CYP90B1 low borderline
GhirD07G0005000.1 Steroid DWF4/CYP90B1 low borderline
GhirD07G0005000.2 Steroid DWF4/CYP90B1 low borderline