PlantSME Plant secondary metabolism enzyme database

Gossypium hirsutum (gossypium_hirsutum)

Imported from atlas release summary for Gossypium hirsutum.

5656
Candidate Protein Records
4579
Pathway-Level Records
11461
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1367 21 BAHD (612) View species results
Alkaloid pathway 1056 25 NMT (183) View species results
Phenylpropanoid pathway 975 12 POD (389) View species results
Flavonoid pathway 507 11 UFGT (306) View species results
Rosmarinic acid pathway 363 7 C4H (130) View species results
Steroid pathway 311 12 CAS (159) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4387 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 960 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
GhirD07G0006200.2 Steroid DWF4/CYP90B1 low borderline
GhirD07G0009300.1 Steroid DWF4/CYP90B1 low borderline
GhirD07G0009310.1 Steroid DWF4/CYP90B1 low borderline
GhirD07G0011630.1 Steroid DWF4/CYP90B1 medium borderline
GhirD07G0014060.1 Steroid DWF4/CYP90B1 low borderline
GhirD07G0021620.1 Steroid DWF4/CYP90B1 medium borderline
GhirD07G0021720.1 Steroid DWF4/CYP90B1 medium borderline
GhirD07G0022160.1 Steroid DWF4/CYP90B1 low borderline
GhirD07G0025130.1 Steroid DWF4/CYP90B1 low borderline
GhirD07G0025140.1 Steroid DWF4/CYP90B1 low borderline
GhirD08G0002130.1 Steroid DWF4/CYP90B1 medium borderline
GhirD08G0016130.1 Steroid DWF4/CYP90B1 low borderline
GhirD08G0019450.1 Steroid DWF4/CYP90B1 medium borderline
GhirD08G0021250.1 Steroid DWF4/CYP90B1 low borderline
GhirD09G0004290.1 Steroid DWF4/CYP90B1 low borderline
GhirD09G0005790.1 Steroid DWF4/CYP90B1 low borderline
GhirD09G0015930.1 Steroid DWF4/CYP90B1 low borderline
GhirD09G0020330.1 Steroid DWF4/CYP90B1 low borderline
GhirD09G0021640.1 Steroid DWF4/CYP90B1 low borderline
GhirD09G0021640.2 Steroid DWF4/CYP90B1 low borderline
GhirD09G0021650.1 Steroid DWF4/CYP90B1 low borderline
GhirD09G0023040.1 Steroid DWF4/CYP90B1 low borderline
GhirD09G0023050.1 Steroid DWF4/CYP90B1 low borderline
GhirD10G0001560.1 Steroid DWF4/CYP90B1 low borderline
GhirD10G0011950.1 Steroid DWF4/CYP90B1 low borderline
GhirD10G0023300.1 Steroid DWF4/CYP90B1 low borderline
GhirD10G0023310.1 Steroid DWF4/CYP90B1 low borderline
GhirD10G0023340.1 Steroid DWF4/CYP90B1 low borderline
GhirD10G0023350.1 Steroid DWF4/CYP90B1 low borderline
GhirD10G0024070.1 Steroid DWF4/CYP90B1 low borderline
GhirD10G0024080.1 Steroid DWF4/CYP90B1 low borderline
GhirD10G0027090.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0004240.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0009380.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0009390.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0009400.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0016730.1 Steroid DWF4/CYP90B1 medium borderline
GhirD11G0018610.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0021540.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0022620.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0024470.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0036850.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0036860.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0036870.1 Steroid DWF4/CYP90B1 low borderline
GhirD11G0039770.1 Steroid DWF4/CYP90B1 low borderline
GhirD12G0005890.1 Steroid DWF4/CYP90B1 low borderline
GhirD12G0006210.1 Steroid DWF4/CYP90B1 low borderline
GhirD12G0018980.1 Steroid DWF4/CYP90B1 low borderline
GhirD12G0020970.1 Steroid DWF4/CYP90B1 low borderline
GhirD12G0023540.1 Steroid DWF4/CYP90B1 low borderline