PlantSME Plant secondary metabolism enzyme database

Gossypium hirsutum (gossypium_hirsutum)

Imported from atlas release summary for Gossypium hirsutum.

4579
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1367 21 BAHD (612) View species results
Alkaloid pathway 1056 25 NMT (183) View species results
Phenylpropanoid pathway 975 12 POD (389) View species results
Flavonoid pathway 507 11 UFGT (306) View species results
Rosmarinic acid pathway 363 7 C4H (130) View species results
Steroid pathway 311 12 CAS (159) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4387 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 960 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status
GhirA01G0005670.1 Steroid ROT3/CYP90C1 medium borderline
GhirA01G0005690.1 Steroid ROT3/CYP90C1 medium borderline
GhirA02G0018890.1 Steroid ROT3/CYP90C1 medium borderline
GhirA02G0018890.2 Steroid ROT3/CYP90C1 medium borderline
GhirA02G0018890.3 Steroid ROT3/CYP90C1 medium borderline
GhirA03G0002490.1 Steroid ROT3/CYP90C1 medium borderline
GhirA03G0002510.1 Steroid ROT3/CYP90C1 medium borderline
GhirA03G0006320.1 Steroid ROT3/CYP90C1 medium borderline
GhirA03G0015010.1 Steroid ROT3/CYP90C1 medium borderline
GhirA05G0024070.1 Steroid ROT3/CYP90C1 low borderline
GhirA06G0004090.1 Steroid ROT3/CYP90C1 low borderline
GhirA06G0017550.1 Steroid ROT3/CYP90C1 medium borderline
GhirA07G0009160.1 Steroid ROT3/CYP90C1 medium borderline
GhirA07G0009160.2 Steroid ROT3/CYP90C1 medium borderline
GhirA08G0017850.1 Steroid ROT3/CYP90C1 medium borderline
GhirA08G0017860.2 Steroid ROT3/CYP90C1 medium borderline
GhirA08G0017860.3 Steroid ROT3/CYP90C1 medium borderline
GhirA09G0002290.1 Steroid ROT3/CYP90C1 low borderline
GhirA09G0021780.2 Steroid ROT3/CYP90C1 medium borderline
GhirA10G0000570.1 Steroid ROT3/CYP90C1 low borderline
GhirA10G0013850.1 Steroid ROT3/CYP90C1 medium borderline
GhirA10G0013870.1 Steroid ROT3/CYP90C1 medium borderline
GhirA11G0019500.1 Steroid ROT3/CYP90C1 medium borderline
GhirA12G0024860.1 Steroid ROT3/CYP90C1 medium borderline
GhirA13G0001310.1 Steroid ROT3/CYP90C1 medium borderline
GhirA13G0006290.1 Steroid ROT3/CYP90C1 medium borderline
GhirD01G0005730.1 Steroid ROT3/CYP90C1 medium borderline
GhirD02G0003500.1 Steroid ROT3/CYP90C1 medium borderline
GhirD02G0018590.1 Steroid ROT3/CYP90C1 medium borderline
GhirD03G0001240.1 Steroid ROT3/CYP90C1 medium borderline
GhirD03G0013960.1 Steroid ROT3/CYP90C1 medium borderline
GhirD03G0013980.1 Steroid ROT3/CYP90C1 low borderline
GhirD03G0017890.1 Steroid ROT3/CYP90C1 medium borderline
GhirD03G0017890.2 Steroid ROT3/CYP90C1 medium borderline
GhirD05G0014670.1 Steroid ROT3/CYP90C1 medium borderline
GhirD05G0024870.1 Steroid ROT3/CYP90C1 low borderline
GhirD05G0042650.1 Steroid ROT3/CYP90C1 medium borderline
GhirD05G0042660.1 Steroid ROT3/CYP90C1 medium borderline
GhirD05G0042690.1 Steroid ROT3/CYP90C1 medium borderline
GhirD06G0004080.1 Steroid ROT3/CYP90C1 low borderline
GhirD06G0004120.1 Steroid ROT3/CYP90C1 low borderline
GhirD06G0019370.1 Steroid ROT3/CYP90C1 medium borderline
GhirD06G0019370.2 Steroid ROT3/CYP90C1 medium borderline
GhirD07G0006200.3 Steroid ROT3/CYP90C1 medium borderline
GhirD07G0009440.1 Steroid ROT3/CYP90C1 medium borderline
GhirD08G0019460.1 Steroid ROT3/CYP90C1 medium borderline
GhirD08G0019480.1 Steroid ROT3/CYP90C1 medium borderline
GhirD09G0002330.1 Steroid ROT3/CYP90C1 low borderline
GhirD09G0002330.2 Steroid ROT3/CYP90C1 low borderline
GhirD09G0002330.3 Steroid ROT3/CYP90C1 low borderline