PlantSME Plant secondary metabolism enzyme database

Gossypium hirsutum (gossypium_hirsutum)

Imported from atlas release summary for Gossypium hirsutum.

4579
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1367 21 BAHD (612) View species results
Alkaloid pathway 1056 25 NMT (183) View species results
Phenylpropanoid pathway 975 12 POD (389) View species results
Flavonoid pathway 507 11 UFGT (306) View species results
Rosmarinic acid pathway 363 7 C4H (130) View species results
Steroid pathway 311 12 CAS (159) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4387 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 960 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
GhirD10G0000570.2 Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
GhirD10G0000580.1 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
GhirD10G0000590.1 Terpenoid TPS medium pass TPS__00061__sp_B9SBU9_TPS5_RICCO
GhirD10G0001900.1 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
GhirD10G0001940.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
GhirD10G0001950.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
GhirD10G0001970.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
GhirD11G0013940.1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
GhirD11G0016830.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
GhirD11G0016840.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
GhirD11G0032970.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
GhirD11G0032980.1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
GhirD11G0033000.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
GhirD11G0033020.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
GhirD11G0033020.2 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
GhirD11G0033030.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
GhirD11G0033040.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
GhirD11G0033050.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
GhirD11G0033060.1 Terpenoid TPS medium pass TPS__00168__sp_Q94JS8_FARS_CITJU
GhirD11G0033070.1 Terpenoid TPS medium pass TPS__00020__sp_A0A1V0QSF6_TS7FN_CANSA
GhirD11G0033080.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
GhirD11G0033150.1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
GhirD11G0033170.1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
GhirD11G0033190.1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
GhirD11G0033200.1 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
GhirD13G0014940.1 Terpenoid TPS medium pass TPS__00110__sp_G0Y7D1_TPS1_LITCU
GhirD13G0017290.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
GhirD13G0017300.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
GhirD13G0017300.2 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO