PlantSME Plant secondary metabolism enzyme database

Gossypium hirsutum (gossypium_hirsutum)

Imported from atlas release summary for Gossypium hirsutum.

4579
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1367 21 BAHD (612) View species results
Alkaloid pathway 1056 25 NMT (183) View species results
Phenylpropanoid pathway 975 12 POD (389) View species results
Flavonoid pathway 507 11 UFGT (306) View species results
Rosmarinic acid pathway 363 7 C4H (130) View species results
Steroid pathway 311 12 CAS (159) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4387 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 960 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
GhirA01G0004250.2 Steroid BR6OX2/CYP85A2 low borderline
GhirA01G0004260.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA01G0004270.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA01G0004280.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA01G0004290.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA01G0006650.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA01G0006660.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA01G0009240.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA01G0009910.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA01G0012350.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA01G0021410.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA01G0022750.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA02G0002730.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA02G0002760.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA02G0002770.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA02G0002790.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA02G0002820.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA02G0002840.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA02G0002870.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA02G0002900.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA02G0009370.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA02G0011040.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA02G0015370.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA03G0002160.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA03G0002190.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA03G0006500.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA04G0006320.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA04G0013590.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA04G0017670.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0002050.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0003460.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0008720.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0009430.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0010230.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0019900.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0020930.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0020950.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0021970.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0027750.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0029720.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0031350.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA05G0033520.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA06G0001450.2 Steroid BR6OX2/CYP85A2 low borderline
GhirA06G0006470.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA06G0008560.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA06G0019700.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA06G0022910.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA07G0000290.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA07G0011720.1 Steroid BR6OX2/CYP85A2 low borderline
GhirA07G0021850.1 Steroid BR6OX2/CYP85A2 low borderline