PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
HvarHygva13250032190 Terpenoid AACT medium borderline
HvarHygva13830039590 Terpenoid AACT medium borderline
HvarHygva1528260072060 Terpenoid AACT medium borderline
HvarHygva1538650078180 Terpenoid AACT medium borderline
HvarHygva1563910117530 Terpenoid AACT low borderline
HvarHygva1566130123730 Terpenoid AACT medium pass
HvarHygva15910207980 Terpenoid AACT low borderline
HvarHygva23590329350 Terpenoid AACT medium borderline
HvarHygva6500440060 Terpenoid AACT medium borderline
HvarHygva10060000610 Terpenoid BAHD low borderline
HvarHygva10090001030 Terpenoid BAHD medium pass
HvarHygva10090001040 Terpenoid BAHD medium pass
HvarHygva10920008870 Terpenoid BAHD medium pass
HvarHygva11480013600 Terpenoid BAHD medium pass
HvarHygva11480013640 Terpenoid BAHD medium pass
HvarHygva1180017330 Terpenoid BAHD medium pass
HvarHygva11930018450 Terpenoid BAHD medium pass
HvarHygva12090019960 Terpenoid BAHD low borderline
HvarHygva12780028020 Terpenoid BAHD low borderline
HvarHygva13060030410 Terpenoid BAHD medium pass
HvarHygva1332680033030 Terpenoid BAHD low borderline
HvarHygva13380033430 Terpenoid BAHD low borderline
HvarHygva13940041680 Terpenoid BAHD medium pass
HvarHygva14000042790 Terpenoid BAHD medium pass
HvarHygva14300046400 Terpenoid BAHD low borderline
HvarHygva14360047350 Terpenoid BAHD low borderline
HvarHygva14520051180 Terpenoid BAHD low borderline
HvarHygva14540051370 Terpenoid BAHD medium pass
HvarHygva14660053030 Terpenoid BAHD medium pass
HvarHygva1507080063840 Terpenoid BAHD medium pass
HvarHygva1521790069360 Terpenoid BAHD medium pass
HvarHygva15230069750 Terpenoid BAHD low borderline
HvarHygva1528170071860 Terpenoid BAHD medium pass
HvarHygva1530280073380 Terpenoid BAHD medium pass
HvarHygva1537640077420 Terpenoid BAHD medium pass
HvarHygva1539860079300 Terpenoid BAHD medium pass
HvarHygva1539910079370 Terpenoid BAHD medium pass
HvarHygva1542120081570 Terpenoid BAHD medium pass
HvarHygva1547400087990 Terpenoid BAHD low borderline
HvarHygva1548610089260 Terpenoid BAHD medium pass
HvarHygva1549500089930 Terpenoid BAHD low borderline
HvarHygva1549930090570 Terpenoid BAHD low borderline
HvarHygva1550090710 Terpenoid BAHD medium pass
HvarHygva1550260091290 Terpenoid BAHD low borderline
HvarHygva1551770093770 Terpenoid BAHD medium pass
HvarHygva1553740096630 Terpenoid BAHD medium pass
HvarHygva1555320099540 Terpenoid BAHD low borderline
HvarHygva1558960105850 Terpenoid BAHD medium pass
HvarHygva1561350111370 Terpenoid BAHD low borderline
HvarHygva1561590112040 Terpenoid BAHD low borderline