PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
HvarHygva15630115210 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
HvarHygva1563830117350 Terpenoid BAHD low borderline BAHD__00097__sp_Q9ZV87_NAPES_ARATH
HvarHygva1565890122620 Terpenoid BAHD medium pass BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
HvarHygva1566320124540 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
HvarHygva1567400129980 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
HvarHygva1569480135820 Terpenoid BAHD medium pass BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
HvarHygva1569660136270 Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
HvarHygva1570410139530 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
HvarHygva1571690143340 Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
HvarHygva15720144720 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
HvarHygva1572590146930 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
HvarHygva1573660151230 Terpenoid BAHD low borderline BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
HvarHygva1573770151420 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
HvarHygva1576320159190 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
HvarHygva1576820161230 Terpenoid BAHD low borderline BAHD__00070__sp_Q9CAN8_MBOA2_ARATH
HvarHygva1577340162450 Terpenoid BAHD low borderline BAHD__00092__sp_Q9SU91_LPXA_ARATH
HvarHygva1577840164400 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
HvarHygva1578030165490 Terpenoid BAHD medium pass BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
HvarHygva1578420166890 Terpenoid BAHD medium pass BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
HvarHygva1578560167250 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
HvarHygva1579620170390 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
HvarHygva1580171330 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
HvarHygva1580250172500 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
HvarHygva1581050175130 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
HvarHygva1581610177280 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
HvarHygva1582060178170 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
HvarHygva1582070178220 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
HvarHygva1583850184480 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
HvarHygva1585100188890 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
HvarHygva1585120188990 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
HvarHygva1585380190250 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
HvarHygva1586120192640 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
HvarHygva1587290197580 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
HvarHygva1587290197710 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
HvarHygva1587330198050 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
HvarHygva1587480198520 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
HvarHygva15970209740 Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
HvarHygva15990210410 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
HvarHygva16340214790 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
HvarHygva16700219580 Terpenoid BAHD low borderline BAHD__00042__sp_Q500Z2_ZDH20_ARATH
HvarHygva16740219970 Terpenoid BAHD low borderline BAHD__00043__sp_Q52T38_ZDH22_ARATH
HvarHygva16750220370 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
HvarHygva17170230120 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
HvarHygva1721840233020 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
HvarHygva1721870233140 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
HvarHygva1730310237950 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
HvarHygva1730320237990 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
HvarHygva1732750240680 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
HvarHygva1732760240710 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
HvarHygva1736940243040 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH