PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
HvarHygva820455950 Alkaloid 8HGO medium borderline
HvarHygva8280457010 Alkaloid 8HGO medium borderline
HvarHygva9260466810 Alkaloid 8HGO medium borderline
HvarHygva1583660184000 Alkaloid ADC medium pass
HvarHygva18460282870 Alkaloid ADC medium pass
HvarHygva29990390830 Alkaloid ADC medium pass
HvarHygva860460610 Alkaloid ADC medium pass
HvarHygva10120001470 Alkaloid BBE low borderline
HvarHygva1384260039850 Alkaloid BBE low borderline
HvarHygva1543140082640 Alkaloid BBE medium borderline
HvarHygva1558130104600 Alkaloid BBE low borderline
HvarHygva16050211930 Alkaloid BBE low borderline
HvarHygva1730230237820 Alkaloid BBE low borderline
HvarHygva1730240237920 Alkaloid BBE low borderline
HvarHygva21220308390 Alkaloid BBE medium borderline
HvarHygva22040315510 Alkaloid BBE low borderline
HvarHygva22710320220 Alkaloid BBE low borderline
HvarHygva27140363970 Alkaloid BBE low borderline
HvarHygva29240382890 Alkaloid BBE low borderline
HvarHygva31100403270 Alkaloid BBE low borderline
HvarHygva6700442340 Alkaloid BBE low borderline
HvarHygva14810056580 Alkaloid CNMT low borderline
HvarHygva1566710126530 Alkaloid CNMT medium pass
HvarHygva1566710126570 Alkaloid CNMT low borderline
HvarHygva1584080185190 Alkaloid CNMT low borderline
HvarHygva1586810194990 Alkaloid CNMT low borderline
HvarHygva1587070196400 Alkaloid CNMT low borderline
HvarHygva1592390208640 Alkaloid CNMT medium borderline
HvarHygva1592410208680 Alkaloid CNMT medium borderline
HvarHygva18850286160 Alkaloid CNMT low borderline
HvarHygva21050306630 Alkaloid CNMT low borderline
HvarHygva29900389700 Alkaloid CNMT low borderline
HvarHygva31080402540 Alkaloid CNMT low borderline
HvarHygva3570409930 Alkaloid CNMT medium borderline
HvarHygva430416900 Alkaloid CNMT low borderline
HvarHygva11250011580 Alkaloid CODM/T6ODM medium borderline
HvarHygva1180017410 Alkaloid CODM/T6ODM medium borderline
HvarHygva12310021470 Alkaloid CODM/T6ODM low borderline
HvarHygva13250032220 Alkaloid CODM/T6ODM medium borderline
HvarHygva1492760059420 Alkaloid CODM/T6ODM medium borderline
HvarHygva1507290063990 Alkaloid CODM/T6ODM medium borderline
HvarHygva15260070940 Alkaloid CODM/T6ODM medium borderline
HvarHygva1528260072090 Alkaloid CODM/T6ODM medium borderline
HvarHygva15310073810 Alkaloid CODM/T6ODM medium borderline
HvarHygva15310073820 Alkaloid CODM/T6ODM medium borderline
HvarHygva1554720098120 Alkaloid CODM/T6ODM medium borderline
HvarHygva1573240149470 Alkaloid CODM/T6ODM medium borderline
HvarHygva1573320149990 Alkaloid CODM/T6ODM medium borderline
HvarHygva1574470152970 Alkaloid CODM/T6ODM medium borderline
HvarHygva1574860154480 Alkaloid CODM/T6ODM medium borderline