PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
HvarHygva1577790164350 Alkaloid CODM/T6ODM medium borderline
HvarHygva1579510169800 Alkaloid CODM/T6ODM medium borderline
HvarHygva1580700174170 Alkaloid CODM/T6ODM medium borderline
HvarHygva1584230185740 Alkaloid CODM/T6ODM medium borderline
HvarHygva1587410198410 Alkaloid CODM/T6ODM medium borderline
HvarHygva16530216950 Alkaloid CODM/T6ODM medium borderline
HvarHygva1727320236050 Alkaloid CODM/T6ODM medium borderline
HvarHygva1727330236060 Alkaloid CODM/T6ODM low borderline
HvarHygva1727340236130 Alkaloid CODM/T6ODM medium borderline
HvarHygva1727350236140 Alkaloid CODM/T6ODM low borderline
HvarHygva1730390238160 Alkaloid CODM/T6ODM medium borderline
HvarHygva1730400238300 Alkaloid CODM/T6ODM medium borderline
HvarHygva1735510241770 Alkaloid CODM/T6ODM medium borderline
HvarHygva1735520241800 Alkaloid CODM/T6ODM medium borderline
HvarHygva1736380242620 Alkaloid CODM/T6ODM medium borderline
HvarHygva1736390242650 Alkaloid CODM/T6ODM medium borderline
HvarHygva1760260280 Alkaloid CODM/T6ODM medium borderline
HvarHygva1771100270950 Alkaloid CODM/T6ODM medium borderline
HvarHygva1771110271040 Alkaloid CODM/T6ODM medium borderline
HvarHygva18280281070 Alkaloid CODM/T6ODM medium borderline
HvarHygva20310299950 Alkaloid CODM/T6ODM medium borderline
HvarHygva22600318890 Alkaloid CODM/T6ODM medium borderline
HvarHygva22660319370 Alkaloid CODM/T6ODM medium borderline
HvarHygva22800321090 Alkaloid CODM/T6ODM medium borderline
HvarHygva23880332060 Alkaloid CODM/T6ODM medium borderline
HvarHygva26050353110 Alkaloid CODM/T6ODM medium borderline
HvarHygva27450367100 Alkaloid CODM/T6ODM medium borderline
HvarHygva29890389580 Alkaloid CODM/T6ODM medium borderline
HvarHygva5230426490 Alkaloid CODM/T6ODM medium pass
HvarHygva5510429270 Alkaloid CODM/T6ODM medium borderline
HvarHygva5960434290 Alkaloid CODM/T6ODM medium borderline
HvarHygva8100454910 Alkaloid CODM/T6ODM medium borderline
HvarHygva8490459160 Alkaloid CODM/T6ODM medium borderline
HvarHygva8610460630 Alkaloid CODM/T6ODM medium borderline
HvarHygva10840008170 Alkaloid COR medium pass
HvarHygva1541740080970 Alkaloid COR medium pass
HvarHygva15520094210 Alkaloid COR medium pass
HvarHygva1561390111550 Alkaloid COR medium pass
HvarHygva1566760126610 Alkaloid COR medium pass
HvarHygva1571760143670 Alkaloid COR medium pass
HvarHygva1576340159260 Alkaloid COR medium pass
HvarHygva16260213880 Alkaloid COR medium pass
HvarHygva20320299980 Alkaloid COR medium pass
HvarHygva20370300240 Alkaloid COR medium pass
HvarHygva21870313760 Alkaloid COR medium pass
HvarHygva2830375340 Alkaloid COR medium pass
HvarHygva30940400660 Alkaloid COR medium pass
HvarHygva5080424710 Alkaloid COR medium pass
HvarHygva1559420106740 Alkaloid CYP719 low borderline
HvarHygva1563130115540 Alkaloid CYP719 low borderline