PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
HvarHygva1579870170910 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva1582470179900 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1583990184620 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva1584660187400 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva1585220189440 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1586820195150 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1586970196080 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1588080200450 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1588850203510 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva15920208600 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva1636120215160 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1636130215180 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva16450216050 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva16980223080 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva17120225350 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva17130226830 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1725360234630 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva1725370234650 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva1731630239520 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1731640239580 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1731710239660 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1731720239700 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1769390269400 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva1769400269480 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva1770620270460 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva1770630270520 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva17930278670 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva18970287470 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva20000297350 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva20000297360 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva20430301030 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva20860305070 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva20860305160 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva21290308890 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva2130309000 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva21320309240 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva21860313620 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva22090315790 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva22260316960 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva2260318860 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva22830321230 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva23750330680 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva23750330730 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva23950332330 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva24200334660 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva24260335140 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva24380336150 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva24380336160 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva24620339040 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva24690339620 Phenylpropanoid C3'H/CYP98A medium borderline