PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
HvarHygva2590351720 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva26580358870 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva26630359330 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva27290365820 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva27290365870 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva27380366480 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva27990372100 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva28320375670 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva28430376460 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva29250383170 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva29390384380 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva29730388080 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva29950390070 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva30380393890 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva30780398930 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva31040401680 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva31120403790 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva3600410320 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva3790412010 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva3800412190 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva3810412280 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva3830412410 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva4000413970 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva510424930 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva5160425450 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva520425940 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva5460428810 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva5480428980 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva5650430820 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva5650430830 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva570431340 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva7070445980 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva8230456290 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva8280457000 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva8330457560 Phenylpropanoid C3'H/CYP98A medium borderline
HvarHygva8400458480 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva8410458610 Phenylpropanoid C3'H/CYP98A medium pass
HvarHygva9260466830 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva9640471230 Phenylpropanoid C3'H/CYP98A low borderline
HvarHygva10480005050 Phenylpropanoid C4H/CYP73A medium borderline
HvarHygva12460023810 Phenylpropanoid C4H/CYP73A low borderline
HvarHygva12830028770 Phenylpropanoid C4H/CYP73A medium borderline
HvarHygva14070043130 Phenylpropanoid C4H/CYP73A low borderline
HvarHygva1489850058440 Phenylpropanoid C4H/CYP73A low borderline
HvarHygva15710140820 Phenylpropanoid C4H/CYP73A medium borderline
HvarHygva1769390269390 Phenylpropanoid C4H/CYP73A low borderline
HvarHygva1769400269470 Phenylpropanoid C4H/CYP73A low borderline
HvarHygva19550292800 Phenylpropanoid C4H/CYP73A low borderline
HvarHygva2020298890 Phenylpropanoid C4H/CYP73A medium borderline
HvarHygva20750304290 Phenylpropanoid C4H/CYP73A low borderline