PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
HvarHygva1579590170230 Rosmarinic Acid C4H medium pass
HvarHygva1579870170910 Rosmarinic Acid C4H low borderline
HvarHygva1583990184620 Rosmarinic Acid C4H medium pass
HvarHygva1584660187400 Rosmarinic Acid C4H low borderline
HvarHygva1585220189440 Rosmarinic Acid C4H low borderline
HvarHygva1586820195140 Rosmarinic Acid C4H low borderline
HvarHygva1586820195150 Rosmarinic Acid C4H low borderline
HvarHygva1588080200450 Rosmarinic Acid C4H low borderline
HvarHygva1588850203510 Rosmarinic Acid C4H low borderline
HvarHygva15920208600 Rosmarinic Acid C4H medium pass
HvarHygva1636120215160 Rosmarinic Acid C4H low borderline
HvarHygva1636130215180 Rosmarinic Acid C4H low borderline
HvarHygva17120225350 Rosmarinic Acid C4H low borderline
HvarHygva17130226830 Rosmarinic Acid C4H medium pass
HvarHygva1725360234630 Rosmarinic Acid C4H low borderline
HvarHygva1725370234650 Rosmarinic Acid C4H low borderline
HvarHygva1731630239520 Rosmarinic Acid C4H low borderline
HvarHygva1731640239580 Rosmarinic Acid C4H low borderline
HvarHygva1769390269390 Rosmarinic Acid C4H low borderline
HvarHygva1769390269400 Rosmarinic Acid C4H medium pass
HvarHygva1769400269470 Rosmarinic Acid C4H low borderline
HvarHygva1769400269480 Rosmarinic Acid C4H medium pass
HvarHygva18970287470 Rosmarinic Acid C4H medium pass
HvarHygva19550292800 Rosmarinic Acid C4H low borderline
HvarHygva20000297350 Rosmarinic Acid C4H medium pass
HvarHygva20000297360 Rosmarinic Acid C4H medium pass
HvarHygva2020298890 Rosmarinic Acid C4H medium pass
HvarHygva20430301030 Rosmarinic Acid C4H low borderline
HvarHygva20750304290 Rosmarinic Acid C4H low borderline
HvarHygva20860305070 Rosmarinic Acid C4H medium pass
HvarHygva20860305160 Rosmarinic Acid C4H low borderline
HvarHygva2130309000 Rosmarinic Acid C4H low borderline
HvarHygva21860313620 Rosmarinic Acid C4H low borderline
HvarHygva22090315790 Rosmarinic Acid C4H medium pass
HvarHygva22260316960 Rosmarinic Acid C4H low borderline
HvarHygva2260318860 Rosmarinic Acid C4H low borderline
HvarHygva22830321230 Rosmarinic Acid C4H low borderline
HvarHygva23750330680 Rosmarinic Acid C4H low borderline
HvarHygva23750330730 Rosmarinic Acid C4H low borderline
HvarHygva23950332330 Rosmarinic Acid C4H low borderline
HvarHygva24200334660 Rosmarinic Acid C4H low borderline
HvarHygva24260335140 Rosmarinic Acid C4H low borderline
HvarHygva24260335180 Rosmarinic Acid C4H low borderline
HvarHygva24380336150 Rosmarinic Acid C4H low borderline
HvarHygva24380336160 Rosmarinic Acid C4H medium pass
HvarHygva24620339040 Rosmarinic Acid C4H medium pass
HvarHygva24690339620 Rosmarinic Acid C4H medium pass
HvarHygva2590351720 Rosmarinic Acid C4H low borderline
HvarHygva26580358870 Rosmarinic Acid C4H low borderline
HvarHygva26630359330 Rosmarinic Acid C4H low borderline