PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
HvarHygva5460428810 Flavonoid F3'H/CYP75B medium borderline
HvarHygva5480428980 Flavonoid F3'H/CYP75B low borderline
HvarHygva5650430830 Flavonoid F3'H/CYP75B medium borderline
HvarHygva580432570 Flavonoid F3'H/CYP75B medium borderline
HvarHygva8230456290 Flavonoid F3'H/CYP75B medium borderline
HvarHygva11250011580 Flavonoid F3H medium borderline
HvarHygva11630015800 Flavonoid F3H medium borderline
HvarHygva11660016180 Flavonoid F3H low borderline
HvarHygva1180017410 Flavonoid F3H medium borderline
HvarHygva1246610023970 Flavonoid F3H medium borderline
HvarHygva13250032220 Flavonoid F3H medium borderline
HvarHygva1360035880 Flavonoid F3H medium borderline
HvarHygva14280045740 Flavonoid F3H medium borderline
HvarHygva14280045750 Flavonoid F3H medium borderline
HvarHygva1438670048320 Flavonoid F3H medium borderline
HvarHygva1494580059840 Flavonoid F3H medium pass
HvarHygva1507290063990 Flavonoid F3H medium borderline
HvarHygva15260070940 Flavonoid F3H medium borderline
HvarHygva1528260072090 Flavonoid F3H medium borderline
HvarHygva15310073810 Flavonoid F3H medium borderline
HvarHygva15310073820 Flavonoid F3H medium borderline
HvarHygva1554720098120 Flavonoid F3H medium borderline
HvarHygva1556760102000 Flavonoid F3H low borderline
HvarHygva1573100148670 Flavonoid F3H medium pass
HvarHygva1573320149990 Flavonoid F3H medium borderline
HvarHygva15740152040 Flavonoid F3H low borderline
HvarHygva15740152050 Flavonoid F3H medium borderline
HvarHygva1574840154450 Flavonoid F3H low borderline
HvarHygva1574860154480 Flavonoid F3H medium borderline
HvarHygva1577790164350 Flavonoid F3H medium pass
HvarHygva1579510169800 Flavonoid F3H medium borderline
HvarHygva1580700174170 Flavonoid F3H medium borderline
HvarHygva1581540176840 Flavonoid F3H medium borderline
HvarHygva1584230185740 Flavonoid F3H medium borderline
HvarHygva1585740191170 Flavonoid F3H medium borderline
HvarHygva1587410198410 Flavonoid F3H medium borderline
HvarHygva1588130200790 Flavonoid F3H low borderline
HvarHygva15920208480 Flavonoid F3H medium pass
HvarHygva16530216950 Flavonoid F3H medium borderline
HvarHygva1718150231140 Flavonoid F3H low borderline
HvarHygva1718180231180 Flavonoid F3H low borderline
HvarHygva1727320236050 Flavonoid F3H low borderline
HvarHygva1727340236130 Flavonoid F3H low borderline
HvarHygva1730390238160 Flavonoid F3H medium pass
HvarHygva1730400238300 Flavonoid F3H medium pass
HvarHygva1735510241770 Flavonoid F3H low borderline
HvarHygva1735520241800 Flavonoid F3H low borderline
HvarHygva1736380242620 Flavonoid F3H medium borderline
HvarHygva1736390242650 Flavonoid F3H medium borderline
HvarHygva1760260280 Flavonoid F3H medium borderline